Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31277
         (669 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g23930.1 68416.m03006 expressed protein                             33   0.17 
At3g10650.1 68416.m01281 expressed protein                             31   0.92 
At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / hea...    29   2.1  
At5g55860.1 68418.m06963 expressed protein contains Pfam profile...    29   3.7  
At1g49590.1 68414.m05560 formin-binding protein-related similar ...    29   3.7  
At5g02250.1 68418.m00148 ribonuclease II family protein contains...    28   4.9  
At5g51850.1 68418.m06428 expressed protein similar to unknown pr...    28   6.5  
At3g43160.1 68416.m04554 expressed protein merozoite surface pro...    28   6.5  
At2g14770.2 68415.m01669 Ulp1 protease family protein similar to...    28   6.5  
At2g14770.1 68415.m01668 Ulp1 protease family protein similar to...    28   6.5  

>At3g23930.1 68416.m03006 expressed protein
          Length = 224

 Score = 33.1 bits (72), Expect = 0.17
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 176 KPAPKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEWRKQR 295
           K   K +  G    IK +D++   +  QLKE   EWRK+R
Sbjct: 17  KETSKDQSRGRRHLIKERDEREKVMFLQLKEAEREWRKER 56


>At3g10650.1 68416.m01281 expressed protein
          Length = 1309

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +3

Query: 516 MPARPDPTSPSQRRAKTSVLSNAQLERNKTKEQLEEEKKISLSIPIK 656
           MP    P +PS+    TS +SN    +  +   LE E+   ++ PI+
Sbjct: 584 MPIGEKPLTPSEAMPSTSYISNGDASQGTSNGSLETERNKFVAFPIE 630


>At5g52640.1 68418.m06535 heat shock protein 81-1 (HSP81-1) / heat
           shock protein 83 (HSP83) nearly identical to SP|P27323
           Heat shock protein 81-1 (HSP81-1) (Heat shock protein
           83) {Arabidopsis thaliana}; contains Pfam profiles
           PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
           HSP90-like domain protein, PF00183: Hsp90 protein
          Length = 705

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 185 PKQEGEGDPEFIKRQDQKRSDLDEQLKEYINEW 283
           PK+E EG+ E +  + +K     +++KE  +EW
Sbjct: 232 PKKENEGEVEEVDEEKEKDGKKKKKIKEVSHEW 264


>At5g55860.1 68418.m06963 expressed protein contains Pfam profile
           PF05701: Plant protein of unknown function (DUF827);
           expression supported by MPSS
          Length = 649

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 525 RPDPTSPSQRRAKTSVLSNAQLERNKTKEQLEEEKKI 635
           +P+P S  +   K + L  AQ E NK KEQL+  + I
Sbjct: 52  KPNPQSAEKVLVKQTELHLAQKELNKLKEQLKNAETI 88


>At1g49590.1 68414.m05560 formin-binding protein-related similar to
           formin binding protein 21 (GI:3550080) [Homo sapiens];
           similar to formin binding protein 21 (GI:3550077) [Mus
           musculus]; similar to Dinap1-interacting protein 1
           (GI:8745458) [Crypthecodinium cohnii]
          Length = 242

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = +3

Query: 513 KMPARPDPTSPSQRRAKTSVLSNAQLERNKTKEQLEEEKKIS 638
           K P R    S + +RA     S+  L  NK K Q E+ KK+S
Sbjct: 169 KPPGRLVTASLNPKRAVKGAASSVDLGNNKRKRQDEKPKKVS 210


>At5g02250.1 68418.m00148 ribonuclease II family protein contains
           Pfam profile PF00773: RNB-like protein
          Length = 803

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +2

Query: 455 KRQRLEEAEKKR-QAMLQAMKDASKTGPNFTIPKKS 559
           +RQR++EAE K  Q  +Q +K A K  P+   P KS
Sbjct: 267 RRQRVKEAEDKEFQEFIQLLKSAKK-APSHAKPPKS 301


>At5g51850.1 68418.m06428 expressed protein similar to unknown
           protein (emb|CAB81354.1)
          Length = 590

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/44 (29%), Positives = 26/44 (59%)
 Frame = +3

Query: 513 KMPARPDPTSPSQRRAKTSVLSNAQLERNKTKEQLEEEKKISLS 644
           + P +P PTS  + R + + LS+++  + K   ++++ KKI  S
Sbjct: 327 RRPIKPSPTSDIRNRKRETFLSDSRDVKAKPLHKIKKFKKIPKS 370


>At3g43160.1 68416.m04554 expressed protein merozoite surface
           protein 2 (MSP-2), EMBL:PFU72951, Plasmodium falciparum
          Length = 295

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +3

Query: 216 SSSVKTRSGRTWMNS*RNTSTNGANSGPRRRMSSNALKRSR 338
           +S+ +TRSGR +++    +ST   NS  R   SS   K  R
Sbjct: 103 NSTTRTRSGRGFIDYVLESSTGTENSSTRTAESSTRTKNGR 143


>At2g14770.2 68415.m01669 Ulp1 protease family protein similar to
           At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
           At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
           At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
           At1g52020, At3g24390,  At4g05280, At1g25886, At4g03300;
           contains Pfam profile PF02902: Ulp1 protease family,
           C-terminal catalytic domain
          Length = 1158

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 531 DPTSPSQRRAKTSVLSNAQLERNKTKEQLEEEKKISLSIPIK 656
           DP   S    KT +  N     N    + EEEKK S  +P K
Sbjct: 838 DPNPGSDEADKTDIPKNNDESDNAAAVEAEEEKKSSPKVPKK 879


>At2g14770.1 68415.m01668 Ulp1 protease family protein similar to
           At3g24380, At5g36840, At5g35010, At3g42740, At4g05290,
           At2g14770, At3g43390, At2g05560, At4g08880, At1g34730,
           At1g27790, At1g34740, At1g27780, At5g36850, At3g42730,
           At1g52020, At3g24390,  At4g05280, At1g25886, At4g03300;
           contains Pfam profile PF02902: Ulp1 protease family,
           C-terminal catalytic domain
          Length = 1139

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 531 DPTSPSQRRAKTSVLSNAQLERNKTKEQLEEEKKISLSIPIK 656
           DP   S    KT +  N     N    + EEEKK S  +P K
Sbjct: 819 DPNPGSDEADKTDIPKNNDESDNAAAVEAEEEKKSSPKVPKK 860


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,529,102
Number of Sequences: 28952
Number of extensions: 164252
Number of successful extensions: 684
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)