Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31273
         (344 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IHT6 Cluster: Putative uncharacterized protein; n=3; ...    32   3.0  
UniRef50_O26013 Cluster: DNA helicase II; n=4; Helicobacter|Rep:...    31   4.0  
UniRef50_A4BKL1 Cluster: Glycosyltransferase-like protein; n=1; ...    31   5.3  
UniRef50_UPI0000499605 Cluster: protein kinase; n=1; Entamoeba h...    31   6.9  
UniRef50_Q84S46 Cluster: Putative uncharacterized protein OJ9990...    30   9.2  
UniRef50_A5C2Q7 Cluster: Putative uncharacterized protein; n=2; ...    30   9.2  
UniRef50_Q4U9D5 Cluster: Importin-alpha, putative; n=2; Theileri...    30   9.2  

>UniRef50_Q8IHT6 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 861

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = -2

Query: 316 GAGPVELIQLSPSLICISNLCIVSDYANTKMTTFGSLTSSAKCTSPI 176
           G GP E +QL  S  C  NL     + N    T GS+T+  K TS I
Sbjct: 458 GMGPPENLQLKASDNCDLNLYKNFKFLNNMSNTSGSITNKGKRTSKI 504


>UniRef50_O26013 Cluster: DNA helicase II; n=4; Helicobacter|Rep:
           DNA helicase II - Helicobacter pylori (Campylobacter
           pylori)
          Length = 682

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1

Query: 263 ELVHRLRLRQYQDDNIRKLNFLRQMHFTH 177
           E  H + + +YQD N  +L FL+++ FTH
Sbjct: 197 ERYHYIMVDEYQDTNALQLEFLKKLSFTH 225


>UniRef50_A4BKL1 Cluster: Glycosyltransferase-like protein; n=1;
           Reinekea sp. MED297|Rep: Glycosyltransferase-like
           protein - Reinekea sp. MED297
          Length = 306

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = -1

Query: 254 HRLRLRQYQDDNIRKL 207
           HRL+ R+YQ DNIRKL
Sbjct: 216 HRLKAREYQSDNIRKL 231


>UniRef50_UPI0000499605 Cluster: protein kinase; n=1; Entamoeba
           histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
           histolytica HM-1:IMSS
          Length = 1061

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -3

Query: 192 NALHPYYLWVEIKIRKVMTALSRTNWLIETGLK 94
           N+ +P Y+ ++ +   +   +S+T+WL  TG+K
Sbjct: 56  NSTNPLYIMIDGRCSLIKNTISKTHWLPSTGIK 88


>UniRef50_Q84S46 Cluster: Putative uncharacterized protein
           OJ9990_A01.121; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OJ9990_A01.121 - Oryza sativa subsp. japonica (Rice)
          Length = 196

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -2

Query: 325 RNGGAGPVELIQLSPSLICISNLCIVSDY 239
           R+ G GP EL+ L PSL+ I  L    DY
Sbjct: 158 RHPGHGPCELLLLVPSLLAILELVCAKDY 186


>UniRef50_A5C2Q7 Cluster: Putative uncharacterized protein; n=2;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 2045

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 248 LRLRQYQDDNIRKLNFLRQMHFTHIIYGLKLR 153
           + +++  D+N+RKL  +RQM F  ++ GL  R
Sbjct: 414 ISIKELHDENLRKLMMMRQMLFWILLVGLSSR 445


>UniRef50_Q4U9D5 Cluster: Importin-alpha, putative; n=2;
           Theileria|Rep: Importin-alpha, putative - Theileria
           annulata
          Length = 1211

 Score = 30.3 bits (65), Expect = 9.2
 Identities = 14/53 (26%), Positives = 27/53 (50%)
 Frame = -1

Query: 287 LSVAHLHIELVHRLRLRQYQDDNIRKLNFLRQMHFTHIIYGLKLRYVK**RHY 129
           LS   L  + + + + RQY +D + +L  +  +  TH++Y  K   +K   +Y
Sbjct: 380 LSSFRLFTKFMKKYKTRQYDEDTLTELKIVLTLSDTHLLYLFKYSMLKFTEYY 432


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 319,878,334
Number of Sequences: 1657284
Number of extensions: 5573328
Number of successful extensions: 11599
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11598
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)