Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31273
         (344 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   1.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   1.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   1.2  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   2.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   2.0  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   4.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 219 HSEA*LPPPNALHPYYLWVEIK 154
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 219 HSEA*LPPPNALHPYYLWVEIK 154
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -3

Query: 219 HSEA*LPPPNALHPYYLWVEIK 154
           H+ + +P P  + P Y W+++K
Sbjct: 182 HNLSSVPQPQPVLPTYKWMQVK 203


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 165 PINNMGEVHLAEEVKLPNV 221
           P+N + EV L +EV+ PN+
Sbjct: 575 PLNAIVEVVLVDEVQSPNL 593


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +3

Query: 165 PINNMGEVHLAEEVKLPNV 221
           P+N + E+ L +EV+ PN+
Sbjct: 575 PLNAIVEIVLVDEVQQPNL 593


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 334 YLYRNGGAGPVELIQLS 284
           Y Y NG AGP+ +   S
Sbjct: 94  YSYANGAAGPIPVSMAS 110


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 240 TPIPR*QHSEA*LPPPNALHPYY 172
           +P+    H+ A  PPP+   P+Y
Sbjct: 16  SPLLTPPHNPAYSPPPSYCDPWY 38


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,856
Number of Sequences: 336
Number of extensions: 1496
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6770240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)