Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31273
         (344 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1564 - 38276207-38276434,38276571-38276707,38277214-382776...    27   5.2  
12_02_0502 - 19746100-19746185,19746745-19750474                       26   6.9  

>01_06_1564 -
           38276207-38276434,38276571-38276707,38277214-38277621,
           38277895-38278256,38278427-38278524,38278727-38278863,
           38279346-38279444,38279753-38280053
          Length = 589

 Score = 26.6 bits (56), Expect = 5.2
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = +2

Query: 266 YANERRRELNKLDRTGTSVTIKILP 340
           Y N+ R ++ +L + G +VT+K+ P
Sbjct: 164 YQNKLRHDVEELSKVGINVTLKVSP 188


>12_02_0502 - 19746100-19746185,19746745-19750474
          Length = 1271

 Score = 26.2 bits (55), Expect = 6.9
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -1

Query: 314 CRSGRAYSTLSVAHLHIELVHRLRLRQYQDDNIRKLNFLRQMH 186
           C      S L + HL +  +     +Q   D IR + FLR +H
Sbjct: 655 CDKSHIRSILKLCHLQVFKLKYFTGKQADLDGIRNMRFLRCLH 697


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,581,616
Number of Sequences: 37544
Number of extensions: 152950
Number of successful extensions: 334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 332
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 494158076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)