Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31273
         (344 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    22   5.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    22   7.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    21   9.7  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    21   9.7  

>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +3

Query: 165 PINNMGEVHLAEEVKLPNV 221
           P+N + EV L +EV+ PN+
Sbjct: 617 PLNAIVEVVLVDEVQQPNL 635


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 193 WRRKLSFRMLSSWYWRNL 246
           W    +FR+++  YW NL
Sbjct: 374 WAFLSAFRLMTQDYWENL 391


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 195 PNALHPYYLWVEIKIRKVMTALSRTNW 115
           PN+L   Y +     RK+ + LSR +W
Sbjct: 270 PNSLSVRYNFRLTDYRKLNSILSRADW 296


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 331 LYRNGGAGPVELIQLSPSLI 272
           +Y N G GP  + Q  P+++
Sbjct: 187 MYTNAGGGPPGVTQQQPNMM 206


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 343,335
Number of Sequences: 2352
Number of extensions: 6908
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24505155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)