BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31273
(344 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC095519-1|AAH95519.1| 312|Homo sapiens taste receptor, type 2,... 33 0.32
BC069066-1|AAH69066.1| 312|Homo sapiens taste receptor, type 2,... 33 0.32
AY724954-1|AAU21150.1| 312|Homo sapiens taste receptor T2R9 pro... 33 0.32
AF227135-1|AAF43908.1| 312|Homo sapiens candidate taste recepto... 33 0.32
AB199065-1|BAD97968.1| 290|Homo sapiens bitter taste receptor T... 33 0.32
AB199064-1|BAD97967.1| 290|Homo sapiens bitter taste receptor T... 33 0.32
AB199063-1|BAD97966.1| 290|Homo sapiens bitter taste receptor T... 33 0.32
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 28 9.0
>BC095519-1|AAH95519.1| 312|Homo sapiens taste receptor, type 2,
member 9 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 192 NALHPYYLWVEIKIRKVMTALSRTNWLI 109
N HP++ W+++KI KVM A+ ++LI
Sbjct: 113 NISHPFFFWLKLKINKVMLAILLGSFLI 140
>BC069066-1|AAH69066.1| 312|Homo sapiens taste receptor, type 2,
member 9 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 192 NALHPYYLWVEIKIRKVMTALSRTNWLI 109
N HP++ W+++KI KVM A+ ++LI
Sbjct: 113 NISHPFFFWLKLKINKVMLAILLGSFLI 140
>AY724954-1|AAU21150.1| 312|Homo sapiens taste receptor T2R9
protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 192 NALHPYYLWVEIKIRKVMTALSRTNWLI 109
N HP++ W+++KI KVM A+ ++LI
Sbjct: 113 NISHPFFFWLKLKINKVMLAILLGSFLI 140
>AF227135-1|AAF43908.1| 312|Homo sapiens candidate taste receptor
T2R9 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 192 NALHPYYLWVEIKIRKVMTALSRTNWLI 109
N HP++ W+++KI KVM A+ ++LI
Sbjct: 113 NISHPFFFWLKLKINKVMLAILLGSFLI 140
>AB199065-1|BAD97968.1| 290|Homo sapiens bitter taste receptor T2R9
protein.
Length = 290
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 192 NALHPYYLWVEIKIRKVMTALSRTNWLI 109
N HP++ W+++KI KVM A+ ++LI
Sbjct: 105 NISHPFFFWLKLKINKVMLAILLGSFLI 132
>AB199064-1|BAD97967.1| 290|Homo sapiens bitter taste receptor T2R9
protein.
Length = 290
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 192 NALHPYYLWVEIKIRKVMTALSRTNWLI 109
N HP++ W+++KI KVM A+ ++LI
Sbjct: 105 NISHPFFFWLKLKINKVMLAILLGSFLI 132
>AB199063-1|BAD97966.1| 290|Homo sapiens bitter taste receptor T2R9
protein.
Length = 290
Score = 32.7 bits (71), Expect = 0.32
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3
Query: 192 NALHPYYLWVEIKIRKVMTALSRTNWLI 109
N HP++ W+++KI KVM A+ ++LI
Sbjct: 105 NISHPFFFWLKLKINKVMLAILLGSFLI 132
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 319 GGAGPVELIQLSPSLICISNLCIVSDYANTKMTTFGSLTSSAKCT 185
G G ++ IQ+SPS + C++S N ++ G+L S +CT
Sbjct: 385 GTIGWLKWIQVSPSRNSVVTSCLISLMKNNRILLKGALNKS-RCT 428
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,957,546
Number of Sequences: 237096
Number of extensions: 859165
Number of successful extensions: 1170
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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