Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31270
(702 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15) 83 2e-16
SB_46583| Best HMM Match : Hus1 (HMM E-Value=0) 80 1e-15
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08) 73 3e-13
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 70 2e-12
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 70 2e-12
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 66 3e-11
SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07) 60 2e-09
SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07) 60 2e-09
SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05) 57 1e-08
SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 53 3e-07
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 52 3e-07
SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028) 50 2e-06
SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24) 40 2e-05
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 43 2e-04
SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16) 40 0.001
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 37 0.018
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.032
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 34 0.13
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.39
SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07) 32 0.39
SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0) 32 0.52
SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25) 32 0.52
SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07) 32 0.52
SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22) 31 0.90
SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7) 31 1.2
SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 30 1.6
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_57512| Best HMM Match : DUF573 (HMM E-Value=4.7) 29 4.8
SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6) 29 4.8
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 29 4.8
SB_50098| Best HMM Match : DUF573 (HMM E-Value=4.7) 29 4.8
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 28 6.4
SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37) 28 8.4
SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_36972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_27837| Best HMM Match : Vicilin_N (HMM E-Value=0.85) 28 8.4
>SB_50692| Best HMM Match : efhand (HMM E-Value=1.5e-15)
Length = 150
Score = 83.0 bits (196), Expect = 2e-16
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Frame = +1
Query: 31 DLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXX 210
+L+ D+ + +F +YD +G KID+ LG++LR L NPT A +
Sbjct: 4 NLTDKDIRQLRESFELYDKQGDEKIDSSQLGEVLRGLGQNPTNAEVKKIVSEMDPEGGNR 63
Query: 211 XXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 387
FLP+Y K + + EDF++ L+++D + +G++ EL H L LGEKL DSE
Sbjct: 64 ISFEEFLPVYQSYMGKKPKFSTEDFVDSLRVFDNDGSGMINEGELRHILTTLGEKLTDSE 123
Query: 388 VAEVTKDCMDPEDDDGMIPYAAFLKKVM 471
V + + ED G I F+ V+
Sbjct: 124 VDSLIQGL---EDKQGQIDCEEFILSVL 148
>SB_46583| Best HMM Match : Hus1 (HMM E-Value=0)
Length = 646
Score = 80.2 bits (189), Expect = 1e-15
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
Frame = +1
Query: 67 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQ 243
AFS++D G GKI+ +G LLR+L NPT A + FLPIY+
Sbjct: 519 AFSLFDRVGDGKIECDQIGCLLRSLGLNPTGAEVKKIEKDVDPKGIARVSFEEFLPIYTS 578
Query: 244 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 423
A + K G+ ++F+E L+++D++ G +L AEL L++LGEKL D EV + +
Sbjct: 579 AYQKKQTGSADEFVEGLRVFDRDGTGTVLAAELRSVLMSLGEKLSDEEVTTLFAPV---D 635
Query: 424 DDDGMIPY 447
D G I Y
Sbjct: 636 DSSGHINY 643
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 73.7 bits (173), Expect = 1e-13
Identities = 47/143 (32%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Frame = +1
Query: 25 MSD-LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXX 201
M+D L++ + AFS++D +G G I LG ++R+L NPT A +
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 202 XXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 378
FL + A+K KD + E+ E +++DK+ NG + AEL H + LGEKL
Sbjct: 61 NGTIDFPEFLTM--MARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLT 118
Query: 379 DSEVAEVTKDCMDPEDDDGMIPY 447
D EV E+ ++ D DG + Y
Sbjct: 119 DEEVDEMIREA--DIDGDGQVNY 139
>SB_45639| Best HMM Match : efhand (HMM E-Value=9.1e-08)
Length = 144
Score = 72.5 bits (170), Expect = 3e-13
Identities = 49/150 (32%), Positives = 73/150 (48%)
Frame = +1
Query: 25 MSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXX 204
M DL+ + AFS++D GKG IDA + D+LRA+ NP + I
Sbjct: 1 MVDLNDEQIGELKDAFSLFDKTGKGYIDADIVIDVLRAVGLNPQIDDIKKTEKELGTKPV 60
Query: 205 XXXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDS 384
FL +Y K K QG E+F+E L+ +D N +G M A+L + L +LG+ L
Sbjct: 61 SFDS--FLSLYVSYSK-KPQGGMEEFIEGLRAFDNNSDGTMSSAQLRNLLTSLGDTLTPD 117
Query: 385 EVAEVTKDCMDPEDDDGMIPYAAFLKKVMA 474
+ + + +D+ G I Y + KVMA
Sbjct: 118 QADAI----VALQDNHGTIEYEKLVDKVMA 143
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 70.1 bits (164), Expect = 2e-12
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +1
Query: 67 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQ 243
AFS++D +G G I LG ++R+L NPT A + FL +
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--M 62
Query: 244 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 423
A+K K+ + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 120
Query: 424 DDDGMIPY 447
D DG + Y
Sbjct: 121 DGDGQVNY 128
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 280 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 459
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 70.1 bits (164), Expect = 2e-12
Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +1
Query: 67 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPIYSQ 243
AFS++D +G G I LG ++R+L NPT A + FL +
Sbjct: 5 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM--M 62
Query: 244 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 423
A+K K+ + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ ++
Sbjct: 63 ARKMKNTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREA--DI 120
Query: 424 DDDGMIPY 447
D DG + Y
Sbjct: 121 DGDGQVNY 128
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/60 (26%), Positives = 31/60 (51%)
Frame = +1
Query: 280 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 459
F E L+DK+ +G + EL + +LG+ ++E+ ++ + D +G I + FL
Sbjct: 2 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFL 59
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 66.1 bits (154), Expect = 3e-11
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Frame = +1
Query: 34 LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXX 213
LS+ V AF+++D +G G I + L ++R+L NPT +
Sbjct: 284 LSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMIAEVDQDDNGEI 343
Query: 214 XXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEV 390
FL + AKK K+ E+ + K++DKN +G++ +EL + LGE+L D EV
Sbjct: 344 DFPEFLQMV--AKKIKETDTEEEIQDAFKVFDKNGDGMISSSELKLVMSNLGERLTDDEV 401
Query: 391 AEVTKDCMDPEDDDGMIPY 447
E+ ++ D DGMI Y
Sbjct: 402 DEMIREA--DIDGDGMIDY 418
Score = 37.9 bits (84), Expect = 0.008
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +1
Query: 238 SQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMD 417
S ++ + + E L+DK+ G + +EL H + +LG+ + E+ ++ +
Sbjct: 278 SSVREKLSEEQVAELKEAFALFDKDGGGSISSSELAHVMRSLGQNPTEQELKDMIAEV-- 335
Query: 418 PEDDDGMIPYAAFLKKV 468
+DD+G I + FL+ V
Sbjct: 336 DQDDNGEIDFPEFLQMV 352
>SB_16922| Best HMM Match : DUF1647 (HMM E-Value=2e-07)
Length = 422
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Frame = +1
Query: 31 DLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXX 210
++ + D + F +YD G KID LG +LRA NPT + +
Sbjct: 273 NMIERDEQLLKDIFDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEVRKVERDFGKSAMAF 332
Query: 211 XXXXFLPIYSQAKKD----KDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 378
FLPIY + + + + E ++C K +D++++G + + L H L +LGE+L
Sbjct: 333 DE--FLPIYHSVTQHCLTTEKKVSSESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERLS 390
Query: 379 DSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 471
D E ++ ++ G I Y +K+V+
Sbjct: 391 DEEFDALSSGYVNAR---GEIDYENMVKEVL 418
>SB_10943| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 154
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
Frame = +1
Query: 31 DLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXX 210
++ + D + F +YD G KID LG +LRA NPT + +
Sbjct: 5 NMIERDEQLLKDIFDLYDTTGSEKIDVGYLGQVLRAAGLNPTQSEVRKVERDFGKSAMAF 64
Query: 211 XXXXFLPIYSQAKKD----KDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLD 378
FLPIY + + + + E ++C K +D++++G + + L H L +LGE+L
Sbjct: 65 DE--FLPIYHSVTQHCLTTEKKVSSESVIDCFKHFDRSDSGYISSSMLRHVLTSLGERLS 122
Query: 379 DSEVAEVTKDCMDPEDDDGMIPYAAFLKKVM 471
D E ++ ++ G I Y +K+V+
Sbjct: 123 DEEFDALSSGYVNAR---GEIDYENMVKEVL 150
>SB_23574| Best HMM Match : efhand (HMM E-Value=2e-05)
Length = 69
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +1
Query: 280 FLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFL 459
F+EC K++D+N NGL+ AEL H L +LG+KL D EV + + ED+ G + Y F+
Sbjct: 7 FMECFKVFDRNGNGLIGAAELRHLLASLGDKLSDEEVDNL---MVGFEDNQGQVFYEDFV 63
Query: 460 KKVM 471
+ VM
Sbjct: 64 RAVM 67
>SB_644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 54.8 bits (126), Expect = 6e-08
Identities = 37/149 (24%), Positives = 60/149 (40%)
Frame = +1
Query: 28 SDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXX 207
+D+++ + AF +D G G+IDA LG ++R++ +P +
Sbjct: 7 TDITEEQIREFKNAFMSFDKNGDGRIDAEELGIVMRSIGLHPKDEELKAMIKQADKDGSG 66
Query: 208 XXXXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSE 387
I A K K+ D E L+DK+ NGL+ E+ +G + + E
Sbjct: 67 DIDLPEF-IELMASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNITEKE 125
Query: 388 VAEVTKDCMDPEDDDGMIPYAAFLKKVMA 474
E+ K D DG I Y F M+
Sbjct: 126 AVELVKQA--DMDGDGHINYEEFKNAFMS 152
Score = 41.9 bits (94), Expect = 5e-04
Identities = 33/127 (25%), Positives = 49/127 (38%)
Frame = +1
Query: 67 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQA 246
AF +D G+IDA L + R++ +P + I A
Sbjct: 149 AFMSFDKNVDGRIDAEELEIVTRSIGLHPKDEELKAMIKQADKDGSGDIDLPEF-IELMA 207
Query: 247 KKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPED 426
K K+ D E L+DK+ NGL+ E+ L +G + + E E+ K D
Sbjct: 208 SKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVLTCMGFNITEKEAVELVKQA--DID 265
Query: 427 DDGMIPY 447
DG I Y
Sbjct: 266 GDGHINY 272
Score = 29.5 bits (63), Expect = 2.8
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 3/156 (1%)
Frame = +1
Query: 25 MSDLSKNDVERASF--AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXX 198
M+ SKND + AFS++D +G G I A + + + N T
Sbjct: 77 MASKSKNDTTESDLREAFSLFDKDGNGLISAQEMKFVFTCMGFNIT-------------- 122
Query: 199 XXXXXXXXFLPIYSQAKKDKDQGA-YEDFLECLKLYDKNENGLMLGAELTHTLLALGEKL 375
+ + QA D D YE+F +DKN +G + EL ++G
Sbjct: 123 -----EKEAVELVKQADMDGDGHINYEEFKNAFMSFDKNVDGRIDAEELEIVTRSIGLHP 177
Query: 376 DDSEVAEVTKDCMDPEDDDGMIPYAAFLKKVMA*KT 483
D E+ + K +D G I F+ ++MA K+
Sbjct: 178 KDEELKAMIKQA--DKDGSGDIDLPEFI-ELMASKS 210
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 52.8 bits (121), Expect = 3e-07
Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Frame = +1
Query: 58 ASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXX-FLPI 234
AS FS++D +G G I L ++++L NP+ + FL +
Sbjct: 2 ASGGFSLFDKDGSGTISNEELEVVMKSLGQNPSDEELQQMIQEVDADGNGEVDFEEFLAM 61
Query: 235 YSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCM 414
+ + +D A + E +++D+N +G + EL + +LGEKL D E+ E+ ++
Sbjct: 62 MKKQMQHRDAEA--EMREAFRVFDRNGDGSISEWELRSVMASLGEKLSDDEIKEMMREA- 118
Query: 415 DPEDDDGMIPYAAFLKKV 468
D DG+I + F++ V
Sbjct: 119 -DLDGDGVINFQEFVQMV 135
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 52.4 bits (120), Expect = 3e-07
Identities = 27/68 (39%), Positives = 39/68 (57%)
Frame = +1
Query: 244 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPE 423
AKK +Q + E+ E +++DK+ NG + AEL H + LGEKL D EV E+ +
Sbjct: 38 AKKMGEQDSDEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIMEA--DI 95
Query: 424 DDDGMIPY 447
D DG + Y
Sbjct: 96 DGDGQVNY 103
>SB_45638| Best HMM Match : efhand (HMM E-Value=0.00028)
Length = 146
Score = 50.0 bits (114), Expect = 2e-06
Identities = 38/135 (28%), Positives = 58/135 (42%)
Frame = +1
Query: 70 FSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAK 249
F ++D G G I+ +G +LRA+ NP + +LPIY++
Sbjct: 15 FMLFDQIGDGNINYDQIGKMLRAMGLNPIDGEVKKVEADFKTKERVSFEE-WLPIYTEFS 73
Query: 250 KDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDD 429
K K A EDFLE LK++D+ NG + L G+K+ + E + D
Sbjct: 74 KKKPP-AKEDFLEGLKVFDREANGKIDSGTFRGLLCNRGDKITEEEADAILAGHEDTV-- 130
Query: 430 DGMIPYAAFLKKVMA 474
G + Y + VMA
Sbjct: 131 KGEVDYNELIDFVMA 145
>SB_10944| Best HMM Match : efhand (HMM E-Value=7.4e-24)
Length = 127
Score = 39.9 bits (89), Expect(2) = 2e-05
Identities = 25/74 (33%), Positives = 37/74 (50%)
Frame = +1
Query: 241 QAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDP 420
+ K +KD + E+ L+ KL+D +E G + L LGE L D E+ E+ +
Sbjct: 50 ELKSEKD--SKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEA--D 105
Query: 421 EDDDGMIPYAAFLK 462
D DG I A FL+
Sbjct: 106 RDGDGEINEAEFLR 119
Score = 26.2 bits (55), Expect(2) = 2e-05
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 1 GNRQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNL 120
G R+ +L++ + AF ++D +G G IDA L
Sbjct: 12 GQRKKTGPKPELTEEQKQEIREAFDLFDTDGSGTIDAKEL 51
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 43.2 bits (97), Expect = 2e-04
Identities = 32/154 (20%), Positives = 68/154 (44%), Gaps = 1/154 (0%)
Frame = +1
Query: 4 NRQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXX 183
+R T + + ++ ++ AF++ D G ID +L D+L +L +PT +
Sbjct: 15 HRATSNVFAMFDQSQIQEFKEAFNMIDQNHDGFIDKEDLHDMLASLGKDPTDGYL---EE 71
Query: 184 XXXXXXXXXXXXXFLPIYSQAKKDKDQGAYEDFL-ECLKLYDKNENGLMLGAELTHTLLA 360
FL ++ + D ED + +D++ NG + L +++
Sbjct: 72 MVKESPGPINFTMFLTLFGEKLNGTDP---EDVIRNAFACFDEDGNGRIHEDLLKEAMMS 128
Query: 361 LGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 462
+G++ D +V ++ +D P D +G + Y+ F +
Sbjct: 129 MGDRFSDEQVDDILRDA--PIDKEGFLDYSKFTR 160
>SB_8146| Best HMM Match : efhand (HMM E-Value=1.2e-16)
Length = 285
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/138 (25%), Positives = 56/138 (40%)
Frame = +1
Query: 34 LSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXX 213
LSK + AF+++D + G I + LG ++RAL NPT I
Sbjct: 4 LSKAQIAEYKEAFNMFDNDRNGTICSHELGSVMRALGQNPTEDMI-------RDMIASAD 56
Query: 214 XXXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVA 393
FL + + K Q + K DK+ +G + +L T+ E L D ++
Sbjct: 57 RTEFLSMMCTVQSGKTQ----EIRMAFKSMDKDGDGFITFGDLKKTMQECDENLSDDDLK 112
Query: 394 EVTKDCMDPEDDDGMIPY 447
+ D D+DG + Y
Sbjct: 113 RMIIDA--DLDEDGRVSY 128
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 38.7 bits (86), Expect = 0.005
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Frame = +1
Query: 67 AFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATI-XXXXXXXXXXXXXXXXXXFLPIYSQ 243
AF +YD +G G + L +R L NPT I F+ +
Sbjct: 153 AFHMYDADGSGHVTTKELHKAMRTLGFNPTEEEIQEMVNEVDYDGNGVLDFNEFVDLMEN 212
Query: 244 AKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTK 405
KK ++ +D + ++D ++ G + +EL L + +K+ + E+ ++ +
Sbjct: 213 QKKPDEE--EQDLINAFHVFDSDDKGYIEASELRDLLCGMEKKIPEDELQDMLR 264
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 36.7 bits (81), Expect = 0.018
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Frame = +2
Query: 8 DKHHTK*ATSARTTLKGRLSPSQSTTLKAKV-RSMPSTLAIS*ERSTQTPHWQPSRNSVV 184
DK T TS +T+ K L+ S+ T+ K + RS+ ++ S + S +T + SRN+
Sbjct: 92 DKQQTTPKTSRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTDR-KKSRNTSP 150
Query: 185 QRRRARSCSHSKSSFPSTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLH* 364
+R S S + P T+ + +KT K S N S T KT +L + T+
Sbjct: 151 KRSPKTSSKSSPKTSPKTSLKTSSKTSP--KTSLNT-SRKTSRKTSLKRSLKTSTKTS-- 205
Query: 365 VRSLTTVKSLKSQRTAWTLKTMTA 436
+++ T S +T W T+
Sbjct: 206 LKTNPTTSPEISLKTRWKTSRKTS 229
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 35.9 bits (79), Expect = 0.032
Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Frame = +1
Query: 97 GKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXXXXFLPIYSQAKKDKDQGAYE 276
G ID G +L+A+ PT++ I S+ + + E
Sbjct: 157 GTIDHTEFGRVLQAIGYTPTISQILDILNAFDKNGDGAIDFDEFVTMSRYFRGRGAEKLE 216
Query: 277 DFL-ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAA 453
+ L + +++D+N +G + EL + LG+ L E E+ M +D DG + Y
Sbjct: 217 ENLRQAFRVFDRNGDGYISAEELRVAVTTLGDALTQDEAEELIG--MLDQDGDGKLGYEE 274
Query: 454 FL 459
F+
Sbjct: 275 FV 276
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 33.9 bits (74), Expect = 0.13
Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 GTDKHHTK*ATSART-TLKGRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNS 178
G+D HTK ++ T+ + +Q+ ++ +V+ S L + E+ H + + +
Sbjct: 2126 GSDSKHTKSTKDEKSKTVPEKQVQAQTKRMETEVKPTKSELENNNEKHMNDLHDESAFSK 2185
Query: 179 VVQRRRARSCSHSKSSFPSTAKQRKTKTRER 271
+V + RA S HS+S P+TA+ TK ++
Sbjct: 2186 LVFKLRAGS--HSESKPPTTAESTMTKKHDQ 2214
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 32.3 bits (70), Expect = 0.39
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Frame = +2
Query: 32 TSARTTLKGRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQR---RRAR 202
TS+ T+ K + SPS+S+ K +S+P ++A S +T + QPS NS +R +R+
Sbjct: 345 TSSLTSRKSQ-SPSKSSGSSQKKQSLPPSIATSSVGIKRTKNPQPSLNSSSERLHTKRSS 403
Query: 203 SCSHSKSSFPSTAKQRK-TKTRERMKI-SWNV*SCMTRTKTVS 325
KSS K+ + + ER+ + +V TR ++VS
Sbjct: 404 LVPLEKSSDKLRVKRPSLSASSERLSVRKQSVSKIDTRRRSVS 446
>SB_15743| Best HMM Match : efhand (HMM E-Value=3.6e-07)
Length = 97
Score = 32.3 bits (70), Expect = 0.39
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 43 NDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPT 156
+++ + AF +D +G G I LG ++R+L NPT
Sbjct: 45 DNISKYRDAFKFFDKDGNGHITTRELGAIMRSLGQNPT 82
>SB_50111| Best HMM Match : GCC2_GCC3 (HMM E-Value=0)
Length = 1115
Score = 31.9 bits (69), Expect = 0.52
Identities = 31/145 (21%), Positives = 57/145 (39%), Gaps = 1/145 (0%)
Frame = +1
Query: 4 NRQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXX 183
NR + K +L + + AF+++D + ID L +RAL + A +
Sbjct: 13 NRGSKPKRRELGEEQRQEIKEAFNLFDTDKDQAIDYHELKVAMRALGFDVKKADVLKIMK 72
Query: 184 XXXXXXXXXXXXX-FLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTLLA 360
F + + D+D E+ + +L+D +++G + L
Sbjct: 73 DYDRESTGKISFDDFNEVMTDWMLDRDP--QEEVFKAFRLFDDDDSGKISLRNLRRVARE 130
Query: 361 LGEKLDDSEVAEVTKDCMDPEDDDG 435
LGE + D E+ + +D D DG
Sbjct: 131 LGENMTDEEL----RAMIDEFDKDG 151
>SB_47206| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.25)
Length = 340
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +1
Query: 1 GNRQTPHKMSDLSKNDVERASFAFSIY 81
GN T +MSD+ ++D++ AS+AFSI+
Sbjct: 87 GNNLTTSEMSDIYESDIDPASWAFSIW 113
>SB_42726| Best HMM Match : efhand (HMM E-Value=6.4e-07)
Length = 49
Score = 31.9 bits (69), Expect = 0.52
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 67 AFSIYDFEGKGKIDAFNLGDLLRALNSNPT 156
AF +D +G G I LG ++R+L NPT
Sbjct: 5 AFKFFDKDGNGHITTRELGAIMRSLGQNPT 34
>SB_3800| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 31.1 bits (67), Expect = 0.90
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 268 AYEDFL-ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIP 444
A ED L + ++ D+++ G + ELT + GE EV E+ +DPE G+I
Sbjct: 59 APEDQLSKAFEVLDQDKKGYLTTEELTKYMTEEGEAFTQEEVEEMLSAAVDPE--KGVIF 116
Query: 445 YAAFL 459
Y F+
Sbjct: 117 YKDFV 121
>SB_27758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1926
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +2
Query: 38 ARTTLKGRL-SPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSH 214
+RT+L R S + + + K RS + + S +++ R RRR+RS SH
Sbjct: 640 SRTSLSSRSRSRDRGGSRRGKRRSRSRSSSYSSRSRSRSRSRDRGRGRKRSRRRSRSSSH 699
Query: 215 SKSSFPSTAKQRKTKTRERMK 277
S SS + + +++ R R +
Sbjct: 700 SSSSLSRSRSRSRSRGRGRRR 720
>SB_16925| Best HMM Match : efhand (HMM E-Value=3e-22)
Length = 132
Score = 31.1 bits (67), Expect = 0.90
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 286 ECLKLYDKNENGLMLGAELTHTLLALGEKLDDSEVAEVTKDCMDPEDDDGMIPYAAFLK 462
+ ++DK+ +G + EL + LGE D E+ ++ D +D G I +A F++
Sbjct: 7 DVFSMFDKDNSGSIDTDELRDVMRELGENPSDKEIQDMIADA--DKDGSGEIRFAQFMQ 63
>SB_29567| Best HMM Match : Polysacc_deac_1 (HMM E-Value=7.7)
Length = 760
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +3
Query: 132 ESAQLKPHTGNHRETRWYKEEGREAAHTRRVPSHLQPSKERQRPGSV*R 278
+ A L + R ++WY A+T V +H++ R+RP SV R
Sbjct: 703 DGAHLIQYKDGVRRSQWYHIRAFVLAYTNSVATHVEADPSRRRPPSVDR 751
>SB_14506| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 30.3 bits (65), Expect = 1.6
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Frame = +1
Query: 37 SKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRALNSNPTLATIXXXXXXXXXXXXXXXX 216
S+ +E AFS+Y+ +G I + +L+R+L NP +
Sbjct: 222 SREQIEEFEDAFSVYNKDGSDNIKTTLVFNLIRSLGHNPPEHEVWEYLNELGLTANSKLK 281
Query: 217 XXFLPIYSQAKKDKDQGAYEDFLECLKLYDKNENGLMLGAELTHTL--LALGEKLDDSEV 390
+ A +Q ++ L ++D ++ G + EL + + ++ D E+
Sbjct: 282 FRDF-VKLMAVIITEQNTEKEINSALNVFDTDQRGYITVEELVEAIDRMPGRSRIRDWEL 340
Query: 391 AEVTKDCMDPEDDDGMIP 444
E+ + DP GMIP
Sbjct: 341 KEIVRKA-DPA-QRGMIP 356
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +2
Query: 227 FPSTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLH*VRSLTTVKSLKSQR 406
FP K RK R +KIS+ SCM+ TK + + SH + + S+TTV + S
Sbjct: 277 FPKDQKLRKIFNRNTIKISY---SCMSNTKQI----IDSHNKRII-ASSITTVDAPTSLA 328
Query: 407 TA 412
TA
Sbjct: 329 TA 330
>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 897
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/45 (22%), Positives = 28/45 (62%)
Frame = +1
Query: 7 RQTPHKMSDLSKNDVERASFAFSIYDFEGKGKIDAFNLGDLLRAL 141
++TP + + +++++YDFEG+G++ +L +L++++
Sbjct: 240 KETPECGMSVKSASSDHQEWSYTLYDFEGQGQVTREDLRNLVKSI 284
>SB_43494| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +2
Query: 209 SHSKSSFPSTAKQRKTKTRERMKISWNV*SCMTRT 313
SHS +F S R KT+ +++I NV C+T+T
Sbjct: 8 SHSTGAFTSFKSNRVHKTQCKIQIDTNVLRCLTQT 42
>SB_6450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 692
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +2
Query: 17 HTK*ATSARTTLKGRLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRR 196
+TK A + + + + S +++ K+ R S+LA S + TQT + +PS S R
Sbjct: 7 NTKPAAMSMDSFRAKKGTSSTSSPKSS-RPGRSSLASSTDSITQTSNARPSSASKPSNSR 65
Query: 197 ARSCSHSKSSFPSTAKQRKTKTRE 268
RS S + + +QR+ K ++
Sbjct: 66 TRSA--SVENLDMSLQQRRDKVKQ 87
>SB_57512| Best HMM Match : DUF573 (HMM E-Value=4.7)
Length = 252
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 227 FPSTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLH*VRSLTTVKSLKSQR 406
FP K RK R MKIS+ SCM+ TK + + SH + + S+TT + S
Sbjct: 54 FPKDHKLRKIFNRNTMKISY---SCMSNTKQI----IDSHDKRII-ASSITTEDAPTSLA 105
Query: 407 TA 412
TA
Sbjct: 106 TA 107
>SB_47205| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.6)
Length = 297
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 1 GNRQTPHKMSDLSKNDVERASFAFSIY 81
GN T +SD+ ++D+ AS+AFSI+
Sbjct: 44 GNNLTTSDISDIYESDINPASWAFSIW 70
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 52 ERASFAFSIYDFEGKGKIDAFNLGDLLRAL 141
E+ +AFS+YD +G G I + +++RA+
Sbjct: 99 EKLKWAFSMYDLDGNGYISRQEMLEIVRAI 128
>SB_50098| Best HMM Match : DUF573 (HMM E-Value=4.7)
Length = 151
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +2
Query: 227 FPSTAKQRKTKTRERMKISWNV*SCMTRTKTVSCLALSSHTRFLH*VRSLTTVKSLKSQR 406
FP K RK R MKIS+ SCM+ TK + + SH + + S+TT + S
Sbjct: 4 FPKDHKLRKIFNRNTMKISY---SCMSNTKQI----IDSHDKRII-ASSITTEDAPTSLA 55
Query: 407 TA 412
TA
Sbjct: 56 TA 57
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Frame = +2
Query: 38 ARTTLKGRL---SPSQSTTLKAKVRSMPSTLAIS*ERSTQTP-HWQPSRNSVVQRRRARS 205
+R ++GR SP+++ + + P + S R +Q+P H P R S R + S
Sbjct: 351 SRPVVRGRRYSQSPNRAPVSQRQRSQSPQRVQASPRRRSQSPDHVSPRRKSQTPNRASTS 410
Query: 206 C-SHSKS-SFPSTAKQRKTKTRERMKIS 283
S+S + ST+ +R++K+ R +S
Sbjct: 411 TRQQSRSPNRASTSSRRQSKSPNRDPVS 438
>SB_45585| Best HMM Match : Swi3 (HMM E-Value=0.37)
Length = 341
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +2
Query: 74 QSTTLKAKVRS--MPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSS----FPS 235
+S KA VRS + S L + S TP Q S++ R + SCS +S F S
Sbjct: 46 ESVGSKASVRSSELESYLKKNTPNSESTPKAQSSKSRRTSSRISTSCSTRSNSYYSDFSS 105
Query: 236 TAKQRKTKTRERMKISW 286
+K K + E+ W
Sbjct: 106 ESKSSKKEVYEKALSPW 122
>SB_43877| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 400 TKDCMDPEDDDGMIPYAAFLKKVMA*KTSQLVISLVIRS 516
+KD +D D PY LK + A SQLV S ++ S
Sbjct: 21 SKDALDAITGDHFNPYCKDLKDISAAPKSQLVASAILLS 59
>SB_36972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/88 (27%), Positives = 35/88 (39%)
Frame = +2
Query: 59 RLSPSQSTTLKAKVRSMPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSSFPST 238
RLS S + P A+ T ++P N+V + A + + FP
Sbjct: 96 RLSALSSDQASFDQTAPPYQKALDDSGYNYTLRYEP--NTVTNVKPANATTSYDKHFPKD 153
Query: 239 AKQRKTKTRERMKISWNV*SCMTRTKTV 322
RK R +KIS+ SCM TK +
Sbjct: 154 NHLRKIFNRNTIKISY---SCMNNTKQI 178
>SB_27837| Best HMM Match : Vicilin_N (HMM E-Value=0.85)
Length = 206
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +2
Query: 74 QSTTLKAKVRS--MPSTLAIS*ERSTQTPHWQPSRNSVVQRRRARSCSHSKSS----FPS 235
+S KA VRS + S L + S TP Q S++ R + SCS +S F S
Sbjct: 46 ESVGSKASVRSSELESYLKKNTPNSESTPKAQSSKSRRTSSRISTSCSTRSNSYYSDFSS 105
Query: 236 TAKQRKTKTRERMKISW 286
+K K + E+ W
Sbjct: 106 ESKSSKKEVYEKALSPW 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,392,543
Number of Sequences: 59808
Number of extensions: 407532
Number of successful extensions: 1400
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1841633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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