Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31269
         (480 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal ...   206   9e-54
AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p pro...   206   9e-54
AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-P...   206   9e-54
AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p pro...   202   3e-52
AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.       28   7.6  
AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2...    28   7.6  
AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA...    28   7.6  

>Y11119-1|CAA72004.1|  120|Drosophila melanogaster S20 ribosomal
           protein protein.
          Length = 120

 Score =  206 bits (504), Expect = 9e-54
 Identities = 99/115 (86%), Positives = 105/115 (91%), Gaps = 1/115 (0%)
 Frame = +2

Query: 89  KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 265
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 266 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 430
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071742-1|AAL49364.1|  120|Drosophila melanogaster RH47995p
           protein.
          Length = 120

 Score =  206 bits (504), Expect = 9e-54
 Identities = 99/115 (86%), Positives = 105/115 (91%), Gaps = 1/115 (0%)
 Frame = +2

Query: 89  KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 265
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 266 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 430
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AE014297-2870|AAF55809.1|  120|Drosophila melanogaster CG15693-PA
           protein.
          Length = 120

 Score =  206 bits (504), Expect = 9e-54
 Identities = 99/115 (86%), Positives = 105/115 (91%), Gaps = 1/115 (0%)
 Frame = +2

Query: 89  KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 265
           KDIEKP   + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65

Query: 266 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 430
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY071353-1|AAL48975.1|  120|Drosophila melanogaster RE38972p
           protein.
          Length = 120

 Score =  202 bits (492), Expect = 3e-52
 Identities = 97/115 (84%), Positives = 104/115 (90%), Gaps = 1/115 (0%)
 Frame = +2

Query: 89  KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 265
           KDIEKP   + + +H IRITLTSRNVRSLE VC DLINGAK Q LRV+GPVRMPTK LRI
Sbjct: 6   KDIEKPHVGDSASVHCIRITLTSRNVRSLENVCRDLINGAKNQNLRVEGPVRMPTKTLRI 65

Query: 266 TTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIAD 430
           TTRKTPCGEGSKTWDRFQMRIHKR+IDLHSPSEIVK+ITSINIEPGVEVEVTIA+
Sbjct: 66  TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEVEVTIAN 120


>AY437926-1|AAR24077.1|  924|Drosophila melanogaster AMO protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 229 GPSPHANQDLAYHHPENSLR*RFKDLGSFSDANPQESDRPTLS 357
           GP P A + +    P  S R   +D G  +   P  SD+P+ S
Sbjct: 78  GPPPTAGKPVRDTGPSTSPRPSLRDPGQSTSDKPSTSDKPSTS 120


>AY283154-1|AAQ18122.1|  924|Drosophila melanogaster polycystin-2
           protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 229 GPSPHANQDLAYHHPENSLR*RFKDLGSFSDANPQESDRPTLS 357
           GP P A + +    P  S R   +D G  +   P  SD+P+ S
Sbjct: 78  GPPPTAGKPVRDTGPSTSPRPSLRDPGQSTSDKPSTSDKPSTS 120


>AE014134-2193|AAF53183.2|  924|Drosophila melanogaster CG6504-PA
           protein.
          Length = 924

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +1

Query: 229 GPSPHANQDLAYHHPENSLR*RFKDLGSFSDANPQESDRPTLS 357
           GP P A + +    P  S R   +D G  +   P  SD+P+ S
Sbjct: 78  GPPPTAGKPVRDTGPSTSPRPSLRDPGQSTSDKPSTSDKPSTS 120


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,522,798
Number of Sequences: 53049
Number of extensions: 504912
Number of successful extensions: 1361
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1360
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)