Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31267
         (827 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q874I3 Cluster: H+/nucleoside cotransporter; n=8; Sacch...    34   5.0  
UniRef50_A0CH46 Cluster: Chromosome undetermined scaffold_18, wh...    33   8.7  

>UniRef50_Q874I3 Cluster: H+/nucleoside cotransporter; n=8;
           Saccharomycetales|Rep: H+/nucleoside cotransporter -
           Candida albicans (Yeast)
          Length = 608

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
 Frame = +1

Query: 460 FGNGNKHGNVYSLTRLSSCK*IAHLIVIVTENVYIYYIPSWNVHTI---IVLSCFFFLKL 630
           F NG   G   + T +  C  I  L+ +    +  ++   WN+  +   ++LS  F+   
Sbjct: 434 FSNGATLGLRIAGTMMIQCMCIIGLVALCN-GILTWFGNYWNIDHLTLELILSYIFYPIG 492

Query: 631 SVLGIPRMPLYLIDKK*NFHVPSNKPVSYNIIMTKGAW 744
            +LG PR  + L++K   +    N+ V+YN++  +  +
Sbjct: 493 FLLGTPRNEILLVNKLIAYKFIQNEYVAYNLLTNEAPY 530


>UniRef50_A0CH46 Cluster: Chromosome undetermined scaffold_18, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_18, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2765

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 13/52 (25%), Positives = 29/52 (55%)
 Frame = +1

Query: 490  YSLTRLSSCK*IAHLIVIVTENVYIYYIPSWNVHTIIVLSCFFFLKLSVLGI 645
            Y + +L   K   HL  +  ++++ Y +  W+  T I++ C++F   ++LG+
Sbjct: 1868 YPINKLIQMK-TMHLFSLFLQDIFKYCLIKWDTITNIIIICYYFKNYALLGM 1918


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 709,723,129
Number of Sequences: 1657284
Number of extensions: 12649277
Number of successful extensions: 25515
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25512
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)