Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31267
         (827 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0923 + 33044283-33044433,33044826-33045242,33046209-330465...    29   3.4  
01_05_0195 - 19111983-19112477,19112646-19113950,19114053-191143...    29   3.4  
05_01_0324 + 2549354-2549482,2550092-2550493,2550789-2551727           29   6.0  
06_03_0782 + 24537212-24537490                                         28   7.9  
05_05_0034 - 21741148-21741275,21741890-21741928,21742007-217421...    28   7.9  

>01_06_0923 +
           33044283-33044433,33044826-33045242,33046209-33046538,
           33046806-33046876,33047283-33047357,33047435-33047578,
           33047645-33047816,33047933-33048616,33048711-33048767,
           33048850-33048956,33049485-33049610,33050221-33050295,
           33050387-33050499,33050789-33050905,33051384-33051444,
           33051690-33051763,33052267-33052388,33052472-33052620,
           33053525-33053635,33053946-33054008,33054689-33054722,
           33055253-33055375,33055971-33056033,33056130-33056196,
           33056311-33056356,33056446-33056552,33056923-33056971,
           33057208-33057273,33057544-33057630
          Length = 1286

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +2

Query: 236 SKIPLLTKLHTSEANKSVLMIKKLLTDFIMLTYELVRSRMSA 361
           S +P+L  L TS+A +  ++  +LL D I +   ++RS +SA
Sbjct: 826 SFLPVLAGLLTSKAERHAIVSLELLLDLIKIFGPVIRSTLSA 867


>01_05_0195 - 19111983-19112477,19112646-19113950,19114053-19114322,
            19118884-19118950,19119229-19119284,19119530-19119590,
            19120181-19120297,19120570-19120682,19120774-19120848,
            19121464-19122045,19122056-19122271,19122372-19122497,
            19126152-19126190,19126266-19126360,19126423-19126962,
            19127102-19127327,19127385-19127437,19127534-19127701,
            19128353-19128707,19128785-19128876,19129891-19129993
          Length = 1717

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 15/42 (35%), Positives = 26/42 (61%)
 Frame = +2

Query: 236  SKIPLLTKLHTSEANKSVLMIKKLLTDFIMLTYELVRSRMSA 361
            S +P+L  L TS+A +  ++  +LL D I +   ++RS +SA
Sbjct: 913  SFLPVLAGLLTSKAERHAIVSLELLLDLIKIFGPVIRSTLSA 954


>05_01_0324 + 2549354-2549482,2550092-2550493,2550789-2551727
          Length = 489

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 272 EANKSVLMIKKLLTDFIMLTYELVRSRMSAQLLYSKL 382
           E  ++V + KKL+TD   L Y L R++    LL  KL
Sbjct: 19  ELRRAVKLRKKLMTDDERLIYSLRRAKKKVALLLQKL 55


>06_03_0782 + 24537212-24537490
          Length = 92

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +1

Query: 538 VIVTENVYIYYIPSWNVHTIIVLS--CFFFLK 627
           V V ENV  Y +  W V +++VL+  CFFFL+
Sbjct: 58  VRVYENVVFYVL--WVVESVVVLANLCFFFLR 87


>05_05_0034 -
           21741148-21741275,21741890-21741928,21742007-21742121,
           21742227-21742292,21743213-21743371,21743573-21743609,
           21743757-21744194,21744735-21744817,21744920-21744956,
           21745146-21745214,21745316-21745407,21745481-21745565,
           21745903-21745982,21746327-21746724,21746813-21747717,
           21747825-21747915,21748617-21750680,21750681-21750749,
           21750850-21751273,21751644-21751763
          Length = 1832

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 170 NIELSSVLNKYTKFRVNPSKPCSKIPLLTKLHTSE 274
           N +L+ +L++Y        KP  +IPL T  H SE
Sbjct: 498 NSKLNKILDEYIHLPEAAPKPSEEIPLATSGHVSE 532


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,643,842
Number of Sequences: 37544
Number of extensions: 326080
Number of successful extensions: 604
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)