Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31267
         (827 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    29   0.13 

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 29.5 bits (63), Expect = 0.13
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)
 Frame = +1

Query: 472  NKHGNVYSLTRLSSCK*IAHLIVIVTENVYIYYIPSWNVHTIIVLSCFFFLK----LSVL 639
            N    ++  T+L S        + +T+   ++Y P  +VH  +VLSC   +K    +SVL
Sbjct: 826  NASSAIHFRTKLLSAACQMQSALSITDLGQLFYRPLRDVHGTVVLSCVNCIKSPKAVSVL 885

Query: 640  GIPRMPLYLIDKK*NFHVPSNKPVSYNIIMTKGAWEYIKSLQFGRLQI 783
                +PL  I KK      S +  S N I+     E I   Q   +++
Sbjct: 886  NSRWIPLNKIHKK---LALSTEESSINEILMNSIQEQINYHQVSNIRL 930


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 752,330
Number of Sequences: 2352
Number of extensions: 14751
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)