Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31267
         (827 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098992-5|AAK73870.1|  151|Caenorhabditis elegans Hypothetical ...    31   1.0  
AF098992-4|AAK73869.2|  250|Caenorhabditis elegans Hypothetical ...    31   1.0  
AJ011523-1|CAB38019.1|  760|Caenorhabditis elegans CHE-2 protein...    29   5.4  
AC006635-2|AAK68383.1|  760|Caenorhabditis elegans Abnormal chem...    29   5.4  
U80440-3|AAK21470.2|  380|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AL021175-1|CAA15965.1|  307|Caenorhabditis elegans Hypothetical ...    28   9.4  
AC024869-3|AAK68605.2|  452|Caenorhabditis elegans Synaptotagmin...    28   9.4  

>AF098992-5|AAK73870.1|  151|Caenorhabditis elegans Hypothetical
           protein F53C3.6b protein.
          Length = 151

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 397 QEELKFDFRFKIAVFQMHHITFGNGNKHGNV-YSLTRLSSC 516
           ++  K D++      ++ H+TF NG K GN+ +      SC
Sbjct: 32  EKPYKCDYQITYEDMELRHVTFANGTKPGNITFGCAEYQSC 72


>AF098992-4|AAK73869.2|  250|Caenorhabditis elegans Hypothetical
           protein F53C3.6a protein.
          Length = 250

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 397 QEELKFDFRFKIAVFQMHHITFGNGNKHGNV-YSLTRLSSC 516
           ++  K D++      ++ H+TF NG K GN+ +      SC
Sbjct: 131 EKPYKCDYQITYEDMELRHVTFANGTKPGNITFGCAEYQSC 171


>AJ011523-1|CAB38019.1|  760|Caenorhabditis elegans CHE-2 protein
           protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 529 HLIVIVTENVYIYYIPSWNVHTII 600
           +LIV+ + ++YIY   +WN  T+I
Sbjct: 345 YLIVVTSSHIYIYSSKNWNTPTMI 368


>AC006635-2|AAK68383.1|  760|Caenorhabditis elegans Abnormal
           chemotaxis protein 2 protein.
          Length = 760

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 529 HLIVIVTENVYIYYIPSWNVHTII 600
           +LIV+ + ++YIY   +WN  T+I
Sbjct: 345 YLIVVTSSHIYIYSSKNWNTPTMI 368


>U80440-3|AAK21470.2|  380|Caenorhabditis elegans Hypothetical
           protein T21E12.2 protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = -3

Query: 294 INTLLLASDVCNLVSNGIFEHGFDGLTRNLVYLLRTDDSSILKKKE 157
           +++LLLA    NLV+        D + + L+ LL T +SS    KE
Sbjct: 217 VSSLLLARTTSNLVAINYLARQNDKIQQKLIALLETSESSENASKE 262


>AL021175-1|CAA15965.1|  307|Caenorhabditis elegans Hypothetical
           protein Y6E2A.1 protein.
          Length = 307

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
 Frame = +1

Query: 409 KFDFRFKIAVFQMHHITFGNG-------NKHGNVYSLTRLSSCK*IAHLIVIVTENVYIY 567
           KF  + K+ VFQ  H   GN        NK   +Y L    SC     ++ ++T N Y  
Sbjct: 14  KFSQKVKLEVFQKKHKKLGNSIFSGIFKNKQAMIYVLGMYCSC--YGMMLSLLTINFYYR 71

Query: 568 YI 573
           Y+
Sbjct: 72  YL 73


>AC024869-3|AAK68605.2|  452|Caenorhabditis elegans Synaptotagmin
           protein 3 protein.
          Length = 452

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = +1

Query: 568 YIPSWNVHTIIVLSCFFFLKLSVLGI--PRMPLYLI 669
           Y+P+ N  +++V+ C    K+ VLG+  P + +YL+
Sbjct: 153 YVPNKNKLSVVVMECKNLKKMDVLGLSDPYVKIYLM 188


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,665,902
Number of Sequences: 27780
Number of extensions: 319297
Number of successful extensions: 651
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 651
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)