Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31266
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    27   0.16 
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    27   0.16 
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    27   0.16 
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    27   0.16 
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    27   0.16 
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    27   0.16 
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           27   0.16 
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    27   0.16 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    27   0.21 
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.4  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    22   4.5  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    22   4.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.5  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   4.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.0  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGRDLTDYLMKILTERGYSFTTTAER 726
           PP S  TP   +P+   +TK +   +PL  S + PG+  T    + L+    S ++T+  
Sbjct: 122 PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASSTSSTSST 179

Query: 727 E 729
           E
Sbjct: 180 E 180


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGRDLTDYLMKILTERGYSFTTTAER 726
           PP S  TP   +P+   +TK +   +PL  S + PG+  T    + L+    S ++T+  
Sbjct: 122 PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179

Query: 727 E 729
           E
Sbjct: 180 E 180


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGRDLTDYLMKILTERGYSFTTTAER 726
           PP S  TP   +P+   +TK +   +PL  S + PG+  T    + L+    S ++T+  
Sbjct: 122 PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179

Query: 727 E 729
           E
Sbjct: 180 E 180


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGRDLTDYLMKILTERGYSFTTTAER 726
           PP S  TP   +P+   +TK +   +PL  S + PG+  T    + L+    S ++T+  
Sbjct: 122 PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179

Query: 727 E 729
           E
Sbjct: 180 E 180


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGRDLTDYLMKILTERGYSFTTTAER 726
           PP S  TP   +P+   +TK +   +PL  S + PG+  T    + L+    S ++T+  
Sbjct: 122 PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179

Query: 727 E 729
           E
Sbjct: 180 E 180


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGRDLTDYLMKILTERGYSFTTTAER 726
           PP S  TP   +P+   +TK +   +PL  S + PG+  T    + L+    S ++T+  
Sbjct: 78  PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 135

Query: 727 E 729
           E
Sbjct: 136 E 136


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGRDLTDYLMKILTERGYSFTTTAER 726
           PP S  TP   +P+   +TK +   +PL  S + PG+  T    + L+    S ++T+  
Sbjct: 122 PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179

Query: 727 E 729
           E
Sbjct: 180 E 180


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 27.1 bits (57), Expect = 0.16
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGRDLTDYLMKILTERGYSFTTTAER 726
           PP S  TP   +P+   +TK +   +PL  S + PG+  T    + L+    S ++T+  
Sbjct: 122 PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASSTSSTSST 179

Query: 727 E 729
           E
Sbjct: 180 E 180


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +1

Query: 526 RCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSP 621
           R  R VVPP   C  P+T+ P P     D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -2

Query: 197 GTRREKHHLLRNRP 156
           G R+  HHL++N+P
Sbjct: 82  GVRKVLHHLIKNKP 95


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 443 GQQREDDPDHVRNIQHARHVRRHPSRA 523
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 197 GTRREKHHLLRNRP 156
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -2

Query: 197 GTRREKHHLLRNRP 156
           G R+  HHL+ N+P
Sbjct: 82  GVRKVIHHLIENKP 95


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 333 TNWDDMEKIWHHTFYNELRVAPEEHPVLLT 422
           T+W + E+I++     +L V     PV+LT
Sbjct: 160 TDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +1

Query: 547 PPVSCWTPATVSPTPCPSTKDTHSPTPLLASGT*PGR 657
           PP S  TP   +P+   +TK +   +PL  S + PG+
Sbjct: 122 PPRS--TPPLSTPSNSNATKSSGLTSPLSVSTSPPGK 156


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 88  KLVRCRCDKMKIKRPAVTANREKQIP 11
           K  R   D+ ++ RPA  ANR    P
Sbjct: 330 KRPRPNIDRHEVTRPAAPANRGNGFP 355


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,364
Number of Sequences: 336
Number of extensions: 4624
Number of successful extensions: 29
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)