Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31263
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine re...    29   3.3  
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z83129-6|CAB63324.1|  101|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    28   5.7  
M22751-1|AAA28106.1|  211|Caenorhabditis elegans protein ( C.ele...    28   5.7  
L15201-2|AAA27945.2|  200|Caenorhabditis elegans Male abnormal p...    28   5.7  
AF277990-1|AAG00458.1|  200|Caenorhabditis elegans MAB-5 protein.      28   5.7  
AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z81533-11|CAE17829.1|  355|Caenorhabditis elegans Hypothetical p...    27   7.5  
U61950-3|AAC24288.1|  469|Caenorhabditis elegans Hypothetical pr...    27   10.0 

>AF068717-4|AAC17764.2|  357|Caenorhabditis elegans Serpentine
           receptor, class w protein144 protein.
          Length = 357

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 478 LIEILNWRRYYTITHKNEALKINKFHFILFKHNPLR 371
           L EI N   YY       ++ IN FHF++  H PLR
Sbjct: 29  LFEISNRVFYYEHYLSVASIFINIFHFLILIHKPLR 64


>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 267  QKTFCFCIVNCLRQACSGGLFWEYWFVLNASRLVEDHLAYAKRGQAE 127
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118


>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 267  QKTFCFCIVNCLRQACSGGLFWEYWFVLNASRLVEDHLAYAKRGQAE 127
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244


>Z83129-6|CAB63324.1|  101|Caenorhabditis elegans Hypothetical
           protein W06G6.10 protein.
          Length = 101

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 303 CPTWMHSGVFFFQKTFCFCIVNCLRQACSG 214
           C + MH  + FF +  C C   C++  C G
Sbjct: 72  CCSCMHGVLRFFAELCCNCCAGCVQGICQG 101


>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical protein
            F16A11.3b protein.
          Length = 1364

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 267  QKTFCFCIVNCLRQACSGGLFWEYWFVLNASRLVEDHLAYAKRGQAE 127
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1072 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1118


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical protein
            F16A11.3a protein.
          Length = 1490

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = -3

Query: 267  QKTFCFCIVNCLRQACSGGLFWEYWFVLNASRLVEDHLAYAKRGQAE 127
            ++TFCF     LR     G+ + Y+F     +L +D +   +    E
Sbjct: 1198 RQTFCFICAQILRDKQCDGIQFRYFFATPLQQLAQDKVPNVRLASCE 1244


>M22751-1|AAA28106.1|  211|Caenorhabditis elegans protein (
           C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
          Length = 211

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 139 WTGRDRWWLGVERTVSSSSHGS 74
           WTG D +W G   T SS S  S
Sbjct: 18  WTGDDSYWAGAGTTASSQSASS 39


>L15201-2|AAA27945.2|  200|Caenorhabditis elegans Male abnormal
           protein 5 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 139 WTGRDRWWLGVERTVSSSSHGS 74
           WTG D +W G   T SS S  S
Sbjct: 7   WTGDDSYWAGAGTTASSQSASS 28


>AF277990-1|AAG00458.1|  200|Caenorhabditis elegans MAB-5 protein.
          Length = 200

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 139 WTGRDRWWLGVERTVSSSSHGS 74
           WTG D +W G   T SS S  S
Sbjct: 7   WTGDDSYWAGAGTTASSQSASS 28


>AC024878-2|AAK85512.1|  345|Caenorhabditis elegans Hypothetical
           protein Y97E10AL.2 protein.
          Length = 345

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 16/66 (24%), Positives = 32/66 (48%)
 Frame = +3

Query: 12  VHNENDTSCPVRVKTHIFAASEP*EDDDTVRSTPSHHRSRPVHV*RTPDDPQPV*TRLGQ 191
           +H E+D   PV++   ++ A++  E D  +R   S +      + R P+ P+ +   +G 
Sbjct: 275 LHAEDDKILPVKLGRALYEAAKDAERDIKIREFSSDYGLGHKFICRYPELPEIIEEFVGS 334

Query: 192 TSTPRT 209
            + P T
Sbjct: 335 VTPPST 340


>Z81533-11|CAE17829.1|  355|Caenorhabditis elegans Hypothetical
           protein F36G9.16 protein.
          Length = 355

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 415 INKFHFILFKHNPLRIYTL*IF 350
           IN FHFI+     +R+YT+ +F
Sbjct: 50  INIFHFIVLTRKSMRVYTINLF 71


>U61950-3|AAC24288.1|  469|Caenorhabditis elegans Hypothetical
           protein C45E5.2 protein.
          Length = 469

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -1

Query: 584 FYVASITTVVNIGVQIKHLIHSIFKKVYLKTN 489
           FY    TT +    ++  L H++F  +YLKTN
Sbjct: 378 FYTEDATTEITAS-ELSKLTHAVFGFLYLKTN 408


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,538,772
Number of Sequences: 27780
Number of extensions: 274952
Number of successful extensions: 669
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)