Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31262
         (459 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    23   1.8  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   4.2  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   5.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.5  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   9.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   9.6  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 410 ISYFGHFIDYGRNRAATLNAISLKCPNI 327
           + +   ++D      A LNA+ +K PN+
Sbjct: 69  VRHLDEYLDVDAGTIAKLNALKVKNPNL 96


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 172 GSHCIRQSIEIEKGAQFKNRMRH 104
           G H +     I+ G QF   +RH
Sbjct: 377 GCHMVDSCSNIQTGEQFARLLRH 399


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 172 GSHCIRQSIEIEKGAQFKNRMRH 104
           G H +     I+ G QF   +RH
Sbjct: 384 GCHMVDSCSNIQTGEQFARLLRH 406


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 416 SKISYFGHFIDYGRNRAATLNAISLKCPNI 327
           S+I +    +D  +      NA+ LK PN+
Sbjct: 63  SRIKHLEPNLDVNQGNLKKFNALKLKNPNL 92


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +3

Query: 279 KQCYQIFNVHKLCAVMY 329
           K+C Q F  H+LC   Y
Sbjct: 476 KECKQDFMPHELCDKYY 492


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = +2

Query: 68  FDYLSCIVNYLLVSHSIFELRALF 139
           F Y  C     L+ HS+  ++  F
Sbjct: 152 FTYYVCNTTIFLIFHSVLPIKRFF 175


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = +3

Query: 99  CWCRILFLNCAPFSISILW 155
           C C + F+NC       +W
Sbjct: 220 CLCSLWFINCTAKGRVAVW 238


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = +3

Query: 99  CWCRILFLNCAPFSISILW 155
           C C + F+NC       +W
Sbjct: 220 CLCSLWFINCTAKGRVAVW 238


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,429
Number of Sequences: 336
Number of extensions: 2294
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)