Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31258
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical pr... 92 2e-19
Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical pr... 92 2e-19
M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light ch... 84 9e-17
AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light ... 84 9e-17
M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light ch... 83 1e-16
AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light ... 83 1e-16
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 75 5e-14
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 75 5e-14
Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-li... 63 2e-10
AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical... 62 2e-10
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 62 3e-10
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 62 3e-10
Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 41 6e-04
U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical pr... 39 0.002
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 39 0.003
U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light c... 38 0.007
L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin l... 38 0.007
Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical pr... 35 0.040
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.64
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 31 0.64
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 30 1.5
Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical pr... 29 2.0
AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical... 29 2.0
AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical ... 29 2.0
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 29 2.6
Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 29 2.6
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 29 2.6
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 29 2.6
U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin rela... 28 6.0
AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical ... 28 6.0
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 7.9
U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,... 27 7.9
AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z46793-3|CAA86772.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 92.3 bits (219), Expect = 2e-19
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Frame = +1
Query: 76 RYGIIGKNDLRATFDSLGRLASEKELDEMVGEASG--PINFTQLLTLFANRMSGGSDEDD 249
R G I + DL+ F SLG+ +E+ +D M+ EA G PINFT LTLF +++G +D ++
Sbjct: 43 RDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFGEKLTG-TDPEE 101
Query: 250 VVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDEAYDQMDI--DDKGYIDTTKL 417
V+ NAF+ FDE+ GK++ E LR L T G+++S ++VDE + I Y++ T++
Sbjct: 102 VIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAPIKGGQFDYVEFTRM 161
Query: 418 IAMLTASAEE 447
+ T +E
Sbjct: 162 LKHGTKDKDE 171
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 3 NVFSMFSQKQVAEFKEAFQLMDHDKVWHHRQERL 104
NVF+MF Q Q+ EFKEAF ++D ++ QE L
Sbjct: 19 NVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDL 52
>Z34801-8|CAA84331.1| 172|Caenorhabditis elegans Hypothetical
protein C56G7.1 protein.
Length = 172
Score = 92.3 bits (219), Expect = 2e-19
Identities = 50/130 (38%), Positives = 80/130 (61%), Gaps = 6/130 (4%)
Frame = +1
Query: 76 RYGIIGKNDLRATFDSLGRLASEKELDEMVGEASG--PINFTQLLTLFANRMSGGSDEDD 249
R G I + DL+ F SLG+ +E+ +D M+ EA G PINFT LTLF +++G +D ++
Sbjct: 43 RDGFIDQEDLKDMFASLGKEVTEQFIDSMINEAPGAQPINFTMFLTLFGEKLTG-TDPEE 101
Query: 250 VVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDEAYDQMDI--DDKGYIDTTKL 417
V+ NAF+ FDE+ GK++ E LR L T G+++S ++VDE + I Y++ T++
Sbjct: 102 VIRNAFQCFDEDNSGKLNEEHLRELLTTMGERYSEEQVDELFRDAPIKGGQFDYVEFTRM 161
Query: 418 IAMLTASAEE 447
+ T +E
Sbjct: 162 LKHGTKDKDE 171
Score = 37.5 bits (83), Expect = 0.007
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 3 NVFSMFSQKQVAEFKEAFQLMDHDKVWHHRQERL 104
NVF+MF Q Q+ EFKEAF ++D ++ QE L
Sbjct: 19 NVFAMFDQAQIQEFKEAFNMIDQNRDGFIDQEDL 52
>M23365-1|AAA28113.1| 170|Caenorhabditis elegans myosin light chain
1 protein.
Length = 170
Score = 83.8 bits (198), Expect = 9e-17
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVIN 261
GII K+DL+ + S+G++A + ++D M+ EASGPINFT LTLF R++ G+D + +I
Sbjct: 42 GIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIIG 100
Query: 262 AFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLT 432
AF FD++ GKI + L L G+ DEV Y + G +D ++T
Sbjct: 101 AFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIEGGEVDYKAFAHLIT 160
Query: 433 ASAEEE 450
A++E
Sbjct: 161 TGAQDE 166
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SMFSQKQVAEFKEAFQLMDHDK 77
+ F QK + EFKEAF +MD +K
Sbjct: 19 AQFDQKTIQEFKEAFGIMDQNK 40
>AC024089-6|AAK09070.2| 170|Caenorhabditis elegans Myosin light
chain protein 1 protein.
Length = 170
Score = 83.8 bits (198), Expect = 9e-17
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVIN 261
GII K+DL+ + S+G++A + ++D M+ EASGPINFT LTLF R++ G+D + +I
Sbjct: 42 GIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIIG 100
Query: 262 AFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLT 432
AF FD++ GKI + L L G+ DEV Y + G +D ++T
Sbjct: 101 AFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIEGGEVDYKAFAHLIT 160
Query: 433 ASAEEE 450
A++E
Sbjct: 161 TGAQDE 166
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SMFSQKQVAEFKEAFQLMDHDK 77
+ F QK + EFKEAF +MD +K
Sbjct: 19 AQFDQKTIQEFKEAFGIMDQNK 40
>M23366-1|AAA28114.1| 170|Caenorhabditis elegans myosin light chain
2 protein.
Length = 170
Score = 83.4 bits (197), Expect = 1e-16
Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVIN 261
GII K+DL+ + S+G++A + ++D M+ EASGPINFT LTLF R++ G+D + ++
Sbjct: 42 GIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIVG 100
Query: 262 AFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLT 432
AF FD++ GKI + L L G+ DEV Y + G +D ++T
Sbjct: 101 AFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIEGGEVDYKAFAHLIT 160
Query: 433 ASAEEE 450
A++E
Sbjct: 161 TGAQDE 166
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SMFSQKQVAEFKEAFQLMDHDK 77
+ F QK + EFKEAF +MD +K
Sbjct: 19 AQFDQKTIQEFKEAFGIMDQNK 40
>AC024089-5|AAK09069.1| 170|Caenorhabditis elegans Myosin light
chain protein 2 protein.
Length = 170
Score = 83.4 bits (197), Expect = 1e-16
Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVIN 261
GII K+DL+ + S+G++A + ++D M+ EASGPINFT LTLF R++ G+D + ++
Sbjct: 42 GIIDKSDLKDLYASMGQIAPDSQIDAMIKEASGPINFTVFLTLFGERLT-GTDPEATIVG 100
Query: 262 AFKTFDEE--GKIDSERLRHALMT-WGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLT 432
AF FD++ GKI + L L G+ DEV Y + G +D ++T
Sbjct: 101 AFAMFDKKDCGKIKEDDLIKILQNKRGEPLDEDEVKAMYKGKPPIEGGEVDYKAFAHLIT 160
Query: 433 ASAEEE 450
A++E
Sbjct: 161 TGAQDE 166
Score = 30.7 bits (66), Expect = 0.85
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 12 SMFSQKQVAEFKEAFQLMDHDK 77
+ F QK + EFKEAF +MD +K
Sbjct: 19 AQFDQKTIQEFKEAFGIMDQNK 40
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 74.5 bits (175), Expect = 5e-14
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDD 249
G I +L SLG+ +E EL +M+ E +G I+F + LT+ A +M +D ++
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD-TDSEE 84
Query: 250 VVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIA 423
+ AF+ FD++G I + LRH + G+K + +EVDE + DID G ++ + +
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 424 MLT 432
M+T
Sbjct: 145 MMT 147
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 21 SQKQVAEFKEAFQLMDHD 74
+++Q+AEFKEAF L D D
Sbjct: 6 TEEQIAEFKEAFSLFDKD 23
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 74.5 bits (175), Expect = 5e-14
Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDD 249
G I +L SLG+ +E EL +M+ E +G I+F + LT+ A +M +D ++
Sbjct: 26 GTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD-TDSEE 84
Query: 250 VVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIA 423
+ AF+ FD++G I + LRH + G+K + +EVDE + DID G ++ + +
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVT 144
Query: 424 MLT 432
M+T
Sbjct: 145 MMT 147
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3
Query: 21 SQKQVAEFKEAFQLMDHD 74
+++Q+AEFKEAF L D D
Sbjct: 6 TEEQIAEFKEAFSLFDKD 23
>Z70034-1|CAA93852.2| 171|Caenorhabditis elegans Hypothetical
protein C18E9.1 protein.
Length = 171
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDD 249
G I +L SLG+ +E+EL +MV E SG I+F + + RM+ +D +
Sbjct: 50 GSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMM-KRMNKENDSE- 107
Query: 250 VVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIA 423
++ AF+ FD +G I ++ R+ + GD+FS EVDE ++DID G ID + +
Sbjct: 108 MIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFAS 167
Query: 424 MLTA 435
+A
Sbjct: 168 TFSA 171
>AJ512489-1|CAD54672.1| 171|Caenorhabditis elegans calmodulin-like
protein protein.
Length = 171
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDD 249
G I +L SLG+ +E+EL +MV E SG I+F + + RM+ +D +
Sbjct: 50 GSISSKELGVAMRSLGQNPTEQELLDMVNEVDIDGSGTIDFGEFCQMM-KRMNKENDSE- 107
Query: 250 VVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIA 423
++ AF+ FD +G I ++ R+ + GD+FS EVDE ++DID G ID + +
Sbjct: 108 MIREAFRVFDRDGNGFITADEFRYFMTHMGDQFSDQEVDEIIAEIDIDGDGQIDYEEFAS 167
Query: 424 MLTA 435
+A
Sbjct: 168 TFSA 171
>AC084159-17|AAK39364.1| 116|Caenorhabditis elegans Hypothetical
protein Y73B3A.12 protein.
Length = 116
Score = 62.5 bits (145), Expect = 2e-10
Identities = 30/86 (34%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +1
Query: 151 LDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK--IDSERLRHALM 324
++E+ + +G I+F + LT+ A +M G +D ++ + AF+ FD++G I + LRH +
Sbjct: 2 INEVDADGNGTIDFPEFLTVMARKMKG-TDSEEEIREAFRVFDKDGNGFISAAELRHVMT 60
Query: 325 TWGDKFSADEVDEAYDQMDIDDKGYI 402
G+K + +EVDE + DID G I
Sbjct: 61 NLGEKLTDEEVDEMIREADIDGDGQI 86
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA 174
G I +LR +LG +++E+DEM+ EA
Sbjct: 48 GFISAAELRHVMTNLGEKLTDEEVDEMIREA 78
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDD 249
G I +L SLG+ +E+E+ EM+ E +G I F + + M + +
Sbjct: 96 GTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMK--ETDSE 153
Query: 250 VVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIA 423
++ AF+ FD++G I ++ R+ ++ G +FS +EVDE ++D+D G ID + +
Sbjct: 154 MIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVK 213
Query: 424 MLT 432
M++
Sbjct: 214 MMS 216
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 62.1 bits (144), Expect = 3e-10
Identities = 35/123 (28%), Positives = 65/123 (52%), Gaps = 6/123 (4%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDD 249
G I +L SLG+ +E+E+ EM+ E +G I F + + M + +
Sbjct: 39 GTISTKELGIAMRSLGQNPTEQEILEMINEVDIDGNGQIEFPEFCVMMKRMMK--ETDSE 96
Query: 250 VVINAFKTFDEEGK--IDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIA 423
++ AF+ FD++G I ++ R+ ++ G +FS +EVDE ++D+D G ID + +
Sbjct: 97 MIREAFRVFDKDGNGVITAQEFRYFMVHMGMQFSEEEVDEMIKEVDVDGDGEIDYEEFVK 156
Query: 424 MLT 432
M++
Sbjct: 157 MMS 159
>Z82282-1|CAB05271.1| 182|Caenorhabditis elegans Hypothetical
protein T07G12.1 protein.
Length = 182
Score = 52.8 bits (121), Expect = 2e-07
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Frame = +1
Query: 124 LGRLASEKELDEMVGE----ASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGK 291
LG +E+EL MV E +G I+F + + M+ +D++ + + AFK FD++G
Sbjct: 52 LGLNPTEEELLNMVNEYDVDGNGKIDFGEFCKMM-KEMNKETDQELIRL-AFKVFDKDGN 109
Query: 292 --IDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAML 429
I ++ +H + T G++FS +EVDE ++D D ID + + M+
Sbjct: 110 GYITAQEFKHFMTTMGERFSEEEVDEIIREVDKDGDEQIDLDEFVNMV 157
>Z81053-2|CAB02878.2| 202|Caenorhabditis elegans Hypothetical
protein E02A10.3 protein.
Length = 202
Score = 48.8 bits (111), Expect = 3e-06
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = +1
Query: 76 RYGIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDE 243
R G I ++L A +LG + ELD+++ E + I+F + + S+
Sbjct: 69 RSGAIAIDELEAAIKNLGLEQTRDELDKIIDEVDQRGNHQIDFDEFCVVMRRLTMKKSNW 128
Query: 244 DDVVINAFKTFD--EEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKL 417
++VV F FD E G I + R L GD +DE +++ D+D G ID +
Sbjct: 129 NEVVKECFTVFDRSENGGISKKDFRFILRELGDITDNQIIDEIFNEADVDGNGVIDYDEF 188
Query: 418 IAML 429
M+
Sbjct: 189 TYMV 192
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 41.1 bits (92), Expect = 6e-04
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLFANRMSGGSDEDD 249
G I + +L LG AS +++ M+ +A +G I+ + L + ++ +E +
Sbjct: 22 GRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFLNVLRRQICDPKEERE 81
Query: 250 VVINAFKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIA 423
+ + F FD+ +G I + L + G+K + E E Q D+D G ID + +
Sbjct: 82 LR-DVFNVFDKNGDGVISIDDLIFVMCQLGEKLTETEAKEMIKQGDLDHDGMIDFQEFVN 140
Query: 424 ML 429
++
Sbjct: 141 II 142
Score = 37.1 bits (82), Expect = 0.010
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = +1
Query: 265 FKTFDE--EGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAML 429
F+ FD+ +G+I + L AL+ G+K S +++ +Q D+D G ID + + +L
Sbjct: 13 FREFDKNGDGRITRQELEVALLQLGEKASNSKIETMIEQADLDGNGCIDIDEFLNVL 69
>U28740-5|AAA68320.1| 229|Caenorhabditis elegans Hypothetical
protein B0563.7 protein.
Length = 229
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/123 (19%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLTLFANRMS-GGSDED 246
G IG +L+ S+G A++ E+D ++ E +G I+F + + S +
Sbjct: 66 GAIGNEELKQAMISIGLHANKAEIDNVIKEVDADGNGEIDFEEFCACMKKSQNIVKSTNE 125
Query: 247 DVVINAFKTFDEE--GKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLI 420
+++ F+ FD++ G I ++ +GD F + ++ + ++D+ G++ +
Sbjct: 126 ELIRECFEIFDQDRNGIITENEFKYIAKEFGD-FDDELAEKVFRELDVSANGHLSADQFA 184
Query: 421 AML 429
++
Sbjct: 185 TIV 187
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 38.7 bits (86), Expect = 0.003
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGEA----SGPINFTQLLTLF-ANRMSGGSDED 246
G I + +LRA +G+ +E ELD M A G I+F + L + AN +S
Sbjct: 36 GYIQREELRAVMQKMGQSPTEDELDAMFQAADKDCDGNIDFQEFLVIAKANPLSLSL--- 92
Query: 247 DVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAM 426
V D +G I LR A G S ++ Y +D ++ G I+ + M
Sbjct: 93 KAVFEELDV-DGDGYITRSELRTAFQRMGHSLSDQDIKAIYRHVDQNNDGKINFQEFCEM 151
Query: 427 LT 432
+T
Sbjct: 152 MT 153
>U00050-10|AAA50701.1| 153|Caenorhabditis elegans Myosin light
chain protein 3, isoforma protein.
Length = 153
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 268 KTFDEE--GKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLTA 435
K FD+E GKI + LRH L+ G++ SADE DE ++ D +G + I + A
Sbjct: 90 KVFDKEETGKILAAELRHILLALGERLSADEADELLKGVE-DGEGMVKYEDFIKKVLA 146
>L03412-1|AAA28112.1| 153|Caenorhabditis elegans alkali myosin
light chain protein.
Length = 153
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 268 KTFDEE--GKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKLIAMLTA 435
K FD+E GKI + LRH L+ G++ SADE DE ++ D +G + I + A
Sbjct: 90 KVFDKEETGKILAAELRHILLALGERLSADEADELLKGVE-DGEGMVKYEDFIKKVLA 146
>Z81120-4|CAB03346.1| 142|Caenorhabditis elegans Hypothetical
protein T12D8.6 protein.
Length = 142
Score = 35.1 bits (77), Expect = 0.040
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +1
Query: 121 SLGRLASEKELDEMVG--EASGPINFTQLLTLFANRMSGGSDEDDV--VINAFKTFDEEG 288
+LG+ +E E+ + VG + ++F + +F + +S ++ V + FD+EG
Sbjct: 33 ALGQNPTEAEIHKCVGSFDREARLSFEDFVPIFQS-VSKNREKHTVEEFVEGLSHFDKEG 91
Query: 289 K--IDSERLRHALMTWGDKFSADEVDE 363
I+ LRH L T G++ S ++VD+
Sbjct: 92 NGMINVAELRHLLTTLGERLSDEDVDQ 118
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.64
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLTLFA 216
G I +DLR +L SE+ELDEM+ E SG ++F + + + +
Sbjct: 110 GYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMMS 158
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.64
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Frame = +1
Query: 82 GIIGKNDLRATFDSLGRLASEKELDEMVGE----ASGPINFTQLLTLFA 216
G I +DLR +L SE+ELDEM+ E SG ++F + + + +
Sbjct: 110 GYINVSDLRDILRALDDNVSEEELDEMIAEIDADGSGTVDFDEFMEMMS 158
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 29.9 bits (64), Expect = 1.5
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +1
Query: 208 LFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDID 387
+ N M D DDVV N + D+ GKID ++ AD DE +
Sbjct: 710 MLENEMDEEDDGDDVVENDAEKIDKSGKIDKIDSDDDEEADDEELEADVTDEVVEDSQEP 769
Query: 388 DKGYIDTTKLIAMLT-ASAEEEGRW 459
+ + T AS E RW
Sbjct: 770 PEATKPAVAAAGLRTIASLAELSRW 794
>Z82256-6|CAB05117.2| 616|Caenorhabditis elegans Hypothetical
protein B0513.5 protein.
Length = 616
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 280 EEGKIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYID 405
+EG++ S+ L G K + V + +D++D D G +D
Sbjct: 283 QEGRLTSQEFYKRLGELGVKTDTESVKKFFDEVDFDSDGIVD 324
>AL132902-14|CAE18021.2| 758|Caenorhabditis elegans Hypothetical
protein Y71A12B.15 protein.
Length = 758
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 289 KIDSERLRHALMTWGDKFSADEVDEAYDQMDIDDKGYIDTTKL 417
K +S L A++T+GD F+ VD +DID ++ T KL
Sbjct: 34 KFNSVELTSAMLTYGDLFNVTIVDLRSISIDIDLVKFLYTQKL 76
>AF047658-1|AAC04418.2| 348|Caenorhabditis elegans Hypothetical
protein K03H6.2 protein.
Length = 348
Score = 29.5 bits (63), Expect = 2.0
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +3
Query: 54 FQLMDHDKVWHHRQE 98
++L+DHDK++HHR E
Sbjct: 269 YELVDHDKMYHHRTE 283
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 471 NDSISTIRSKTPAA---VITPGHRFTRIKHHHMN 563
+D I+ + TPA V G+RF R+ HHH+N
Sbjct: 407 SDEITELADLTPAGKEHVRMVGNRFVRMLHHHVN 440
>Z83125-3|CAB05626.1| 424|Caenorhabditis elegans Hypothetical
protein T15D6.4 protein.
Length = 424
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +1
Query: 187 NFTQLLTLFANRMSGGSDEDDVVINAFKTFDEEGKIDSERLRHALM 324
NF +++ ANRM G ++ +V+ F+T + E ++ + L L+
Sbjct: 171 NFAKMVKPVANRMIDGMNKQVLVVRRFETNETELPLNLDELEQGLL 216
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 471 NDSISTIRSKTPAA---VITPGHRFTRIKHHHMN 563
+D I+ + TPA V G+RF R+ HHH+N
Sbjct: 407 SDEITELADLTPAGKEHVRMVGNRFVRMLHHHVN 440
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 471 NDSISTIRSKTPAA---VITPGHRFTRIKHHHMN 563
+D I+ + TPA V G+RF R+ HHH+N
Sbjct: 381 SDEITELADLTPAGKEHVRMVGNRFVRMLHHHVN 414
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 471 NDSISTIRSKTPAA---VITPGHRFTRIKHHHMN 563
+D I+ + TPA V G+RF R+ HHH+N
Sbjct: 346 SDEITELADLTPAGKEHVRMVGNRFVRMLHHHVN 379
>U70851-8|AAB09131.1| 164|Caenorhabditis elegans Calmodulin
related genes protein 3 protein.
Length = 164
Score = 27.9 bits (59), Expect = 6.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 6 VFSMFSQKQVAEFKEAFQLMDHD 74
V S +++++ EFKEAF L D D
Sbjct: 19 VISQLTEEEIHEFKEAFLLFDKD 41
>AC025722-7|AAK68510.1| 540|Caenorhabditis elegans Hypothetical
protein Y50D4C.5 protein.
Length = 540
Score = 27.9 bits (59), Expect = 6.0
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 20 LTEAGRRVQGGIPANGSRQGMASSARTTCAPPSTPWAGSRPRRSSMRWSVR 172
L EAG R+ G+P+ +S +T PSTP +RP ++ + SV+
Sbjct: 318 LAEAGTRIPAGMPSRSMTDVTLASTAST-PTPSTP-LPTRPAAAAAQKSVK 366
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 465 PRNDSISTIRSKTPAAVITPGHRFTRIKHHHMNQT 569
P + T RS+TP A++ P + T + HH +++
Sbjct: 256 PVKKTRGTGRSRTPEAILNPRKQRTPVNHHKRSKS 290
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 27.5 bits (58), Expect = 7.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 465 PRNDSISTIRSKTPAAVITPGHRFTRIKHHHMNQT 569
P + T RS+TP A++ P + T + HH +++
Sbjct: 256 PVKKTRGTGRSRTPEAILNPRKQRTPVNHHKRSKS 290
>U41991-1|AAA83341.2| 1400|Caenorhabditis elegans Rna polymerase,
class iii (c) protein1 protein.
Length = 1400
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 118 DSLGRLASEKELDEMVGEASGPINFTQLLTLFANRMSGGSDEDDVVINAFKTFDEE 285
D LG+ A+ ++ VG+ + FT L LF ++ E D+ + ++ +E+
Sbjct: 186 DELGKFATMFSSNQEVGDHVRKMKFTLLNPLFVQKLFSNIKEGDIPVLMVRSGEEK 241
>AL022716-4|CAA18773.1| 703|Caenorhabditis elegans Hypothetical
protein C24F3.4 protein.
Length = 703
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 319 LMTWGDKFSADEVDE 363
L WGDK+S DE++E
Sbjct: 625 LQLWGDKYSIDEIEE 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,414,903
Number of Sequences: 27780
Number of extensions: 200924
Number of successful extensions: 856
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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