Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31256
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical pr...    30   1.5  
AF068720-5|AAC17788.1|  333|Caenorhabditis elegans Seven tm rece...    30   1.9  
AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm rec...    30   1.9  
AY383563-2|AAQ96594.1|  533|Caenorhabditis elegans excitatory GA...    29   2.6  
AY383563-1|AAQ96595.1|  539|Caenorhabditis elegans excitatory GA...    29   2.6  
AF098990-1|AAC67448.3|  539|Caenorhabditis elegans Expulsion def...    29   2.6  
Z81544-2|CAB04434.1|  342|Caenorhabditis elegans Hypothetical pr...    28   5.9  
U41991-5|AAA83345.3|  345|Caenorhabditis elegans Seven tm recept...    28   5.9  
AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical...    28   5.9  
AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical...    28   5.9  
AL110485-28|CAD36500.1|  145|Caenorhabditis elegans Hypothetical...    28   5.9  
AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical...    28   5.9  
Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AF016432-5|AAB65378.1|  347|Caenorhabditis elegans Seven tm rece...    28   7.9  

>Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical
           protein F55B12.6 protein.
          Length = 350

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 30  KYLLVEASIFAFCYSTTDGVVRPSPTSHSTDVMIL 134
           +YL++  S FA  +ST D +V P   +H T   +L
Sbjct: 42  RYLMIYFSCFAMFFSTIDVIVAPFIHTHGTSATVL 76


>AF068720-5|AAC17788.1|  333|Caenorhabditis elegans Seven tm
           receptor protein 236 protein.
          Length = 333

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/36 (33%), Positives = 24/36 (66%)
 Frame = +3

Query: 30  KYLLVEASIFAFCYSTTDGVVRPSPTSHSTDVMILS 137
           KYL+V  S+F   ++T D +V+P   S+S+  ++++
Sbjct: 42  KYLMVYISVFELIFATLDLIVQPEFFSYSSVYLVIA 77


>AC006695-16|AAK71874.1|  364|Caenorhabditis elegans Seven tm
           receptor protein 206 protein.
          Length = 364

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +3

Query: 30  KYLLVEASIFAFCYSTTDGVVRPSPTSHSTDVMILS 137
           KYL+   SIF  CYS  D +V P   S+ +   I++
Sbjct: 44  KYLMNFISIFEICYSIVDYIVVPVMHSYGSSFFIMT 79


>AY383563-2|AAQ96594.1|  533|Caenorhabditis elegans excitatory GABA
           receptor EXP-1A protein.
          Length = 533

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 334 YFYGFWIFCSLLILLFPNL 278
           +F+GF IFC    L++PNL
Sbjct: 494 FFFGFVIFCLFYFLIYPNL 512


>AY383563-1|AAQ96595.1|  539|Caenorhabditis elegans excitatory GABA
           receptor EXP-1B protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 334 YFYGFWIFCSLLILLFPNL 278
           +F+GF IFC    L++PNL
Sbjct: 500 FFFGFVIFCLFYFLIYPNL 518


>AF098990-1|AAC67448.3|  539|Caenorhabditis elegans Expulsion
           defective (defecation)protein 1 protein.
          Length = 539

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 334 YFYGFWIFCSLLILLFPNL 278
           +F+GF IFC    L++PNL
Sbjct: 500 FFFGFVIFCLFYFLIYPNL 518


>Z81544-2|CAB04434.1|  342|Caenorhabditis elegans Hypothetical
           protein F49C5.6 protein.
          Length = 342

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 30  KYLLVEASIFAFCYSTTDGVVRPSPTSHSTDVMIL 134
           +YL++  S+F   YS  D V+ P   SH    +++
Sbjct: 44  RYLMIYISVFEMFYSIIDLVIDPQHYSHGPTFLVI 78


>U41991-5|AAA83345.3|  345|Caenorhabditis elegans Seven tm receptor
           protein 1 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 30  KYLLVEASIFAFCYSTTDGVVRPSPTSHSTDVMIL 134
           KYLL   SIF   Y+  D +V P   +H +  M++
Sbjct: 42  KYLLTYISIFELVYAVLDVLVSPQLYTHKSAFMLV 76


>AL117203-21|CAN86632.1|  171|Caenorhabditis elegans Hypothetical
           protein Y48C3A.18b protein.
          Length = 171

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 8/16 (50%), Positives = 15/16 (93%)
 Frame = -1

Query: 334 YFYGFWIFCSLLILLF 287
           +FY F++FC+L++L+F
Sbjct: 155 FFYDFFLFCTLILLIF 170


>AL117203-20|CAB55118.1|  244|Caenorhabditis elegans Hypothetical
           protein Y48C3A.18a protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 8/16 (50%), Positives = 15/16 (93%)
 Frame = -1

Query: 334 YFYGFWIFCSLLILLF 287
           +FY F++FC+L++L+F
Sbjct: 228 FFYDFFLFCTLILLIF 243


>AL110485-28|CAD36500.1|  145|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26b protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 334 YFYGFWIFCSLLILLFPNL 278
           +F+GF IFC    L++PN+
Sbjct: 106 FFFGFVIFCLFYFLVYPNI 124


>AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26a protein.
          Length = 515

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -1

Query: 334 YFYGFWIFCSLLILLFPNL 278
           +F+GF IFC    L++PN+
Sbjct: 476 FFFGFVIFCLFYFLVYPNI 494


>Z92781-5|CAB07179.2| 1391|Caenorhabditis elegans Hypothetical protein
            F09C3.1 protein.
          Length = 1391

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -2

Query: 114  SEMLDWGGQRHLLSNSKKRISKLLLVG 34
            +EML  G Q HL + +KK + +LLL G
Sbjct: 1130 NEMLPDGTQAHLFTRAKKELVELLLEG 1156


>AF016432-5|AAB65378.1|  347|Caenorhabditis elegans Seven tm
           receptor protein 225 protein.
          Length = 347

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 30  KYLLVEASIFAFCYSTTDGVVRPSPTSHSTDVMIL 134
           K+L+V  S+F   YS  D V+ P   SH +  +++
Sbjct: 44  KWLMVYISVFEIFYSILDVVLVPQHYSHGSTFLVI 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,243,636
Number of Sequences: 27780
Number of extensions: 264296
Number of successful extensions: 618
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)