Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31256
         (730 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   1.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   2.9  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   3.9  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   3.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   3.9  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   3.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
 Frame = -2

Query: 570 NSASDNAIF---NKKCSLFNAXXXXXXXLCDLYSVS*LMRNNI 451
           +S  D++I    NK+  +F          C++Y+ S  M NN+
Sbjct: 346 SSVRDSSIICGGNKRSQVFRGRDANRQNSCNIYNASSRMENNL 388


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 234 NRNTMLNTFLINVILNTFYF 175
           N    LN F+ ++ LNT+YF
Sbjct: 215 NLENKLNYFIEDIGLNTYYF 234


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 627 RTF*KILLNLFFCSYPALFNSA 562
           RTF ++LL+L    YP L + A
Sbjct: 125 RTFLRVLLHLAMHDYPPLVSGA 146


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 188 FSITLIKNVFNIVFLFVY 241
           FSI  I ++F I+ +F+Y
Sbjct: 5   FSIMFIHSIFLILIIFIY 22


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 188 FSITLIKNVFNIVFLFVY 241
           FSI  I ++F I+ +F+Y
Sbjct: 5   FSIMFIHSIFLILIIFIY 22


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 627 RTF*KILLNLFFCSYPALFNSA 562
           RTF ++LL+L    YP L + A
Sbjct: 93  RTFLRVLLHLAMHDYPPLVSGA 114


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,817
Number of Sequences: 438
Number of extensions: 4084
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)