Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31256
         (730 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g44280.1 68415.m05510 expressed protein                             29   4.2  
At3g47590.1 68416.m05181 esterase/lipase/thioesterase family pro...    28   7.3  
At1g77210.1 68414.m08993 sugar transporter, putative similar to ...    28   7.3  

>At2g44280.1 68415.m05510 expressed protein
          Length = 218

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 319 WIFCSLLILLFPNL*NYYLIAL 254
           WIFC + ILL P   N Y+ A+
Sbjct: 164 WIFCGISILLLPRSINSYMYAI 185


>At3g47590.1 68416.m05181 esterase/lipase/thioesterase family
           protein low similarity to cinnamoyl ester hydrolase CinI
           [Butyrivibrio fibrisolvens] GI:1622732; contains
           Interpro entry IPR000379
          Length = 309

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +2

Query: 11  PLARVTKVPTSRSFDIRFLLFDNRWRCPPQSNISLD 118
           P  + +  PTS  F++RF + +N+  C    N+ +D
Sbjct: 16  PYYKTSPFPTSSFFNVRFPIKNNQISCNKAKNLRMD 51


>At1g77210.1 68414.m08993 sugar transporter, putative similar to
           monosaccharide transporter PaMst-1 [Picea abies]
           GI:2258137, sugar carrier protein GI:169735 from
           [Ricinus communis], glucose transporter [Saccharum
           hybrid cultivar H65-7052] GI:347855; contains Pfam
           profile PF00083: major facilitator superfamily protein
          Length = 504

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +3

Query: 27  RKYLLVEASIFAFCYSTTDGV 89
           R++LL+EAS+  FCY    GV
Sbjct: 350 RRFLLLEASVEMFCYMVVVGV 370


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,787,631
Number of Sequences: 28952
Number of extensions: 221124
Number of successful extensions: 440
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)