Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31255
(762 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q23KE3 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q54CZ0 Cluster: Transcription initiation factor TFIID s... 38 0.21
UniRef50_A0DD19 Cluster: Chromosome undetermined scaffold_46, wh... 36 0.83
UniRef50_Q05FG6 Cluster: Putative uncharacterized protein; n=1; ... 36 1.4
UniRef50_Q1MNT0 Cluster: NA; n=1; Lawsonia intracellularis PHE/M... 35 1.9
UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355; ... 35 1.9
UniRef50_A7SC42 Cluster: Predicted protein; n=2; Nematostella ve... 35 2.5
UniRef50_Q22SM6 Cluster: Zinc finger, C3HC4 type; n=1; Tetrahyme... 34 4.4
UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092; ... 33 5.8
>UniRef50_Q23KE3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 281
Score = 44.0 bits (99), Expect = 0.004
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 226 YKKHLFP*YNHLKNYYLLIHCLLIFYF*FCFTINKYK---KHAFL*YNHLTNYFFYTLFT 396
Y ++ YN N +L++ +L+ Y FCF +N+Y + FL + +LT + FYT FT
Sbjct: 13 YGNTVYMSYNISDNKFLIVKMILMIYLMFCFVLNQYNYFGQGYFLQFVYLTIWGFYTTFT 72
Query: 397 NANFI*VVKIYLYIYK 444
+ Y+Y+ K
Sbjct: 73 YFLLSLIYGFYVYLKK 88
>UniRef50_Q54CZ0 Cluster: Transcription initiation factor TFIID
subunit; n=3; Eukaryota|Rep: Transcription initiation
factor TFIID subunit - Dictyostelium discoideum AX4
Length = 3004
Score = 38.3 bits (85), Expect = 0.21
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +1
Query: 262 KNYYLLIHCLLIFYF*FCFTINKYKKHAFL*YNHLTNYFFYTLFTNANFI*VVKIYLYIY 441
K ++ + +F F F F ++ Y + F Y YF + +F F + I+ +I+
Sbjct: 850 KIFFCFSFLIYLFIFGFWFLVDFYFFYFFFFYFFFFIYFIFFIFFFFYFY-FIFIFFFIF 908
Query: 442 KLIKTFFFFCKHKWEAIIF 498
FFFF + W + IF
Sbjct: 909 SFFNFFFFFFFNLWNSFIF 927
>UniRef50_A0DD19 Cluster: Chromosome undetermined scaffold_46, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_46,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 898
Score = 36.3 bits (80), Expect = 0.83
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = +1
Query: 268 YYLLIHCLLIFYF*FCFTINKYKKHAFL*YNHLTNYFFYTLFTNANFI*VVKIYLYIYKL 447
Y+L+ +CL+ Y N+ K F+ F Y + N++ ++KI LY+Y
Sbjct: 95 YFLIQYCLITVYI-LVTVQNEEKNKIFI--------FLYLILVNSHSNIIIKILLYLYFS 145
Query: 448 IKTFFFFCKHKWEAIIFCSILF 513
FF+ E I C I F
Sbjct: 146 FTIIFFYKLETLEVCIICIIAF 167
>UniRef50_Q05FG6 Cluster: Putative uncharacterized protein; n=1;
Candidatus Carsonella ruddii PV|Rep: Putative
uncharacterized protein - Carsonella ruddii (strain PV)
Length = 108
Score = 35.5 bits (78), Expect = 1.4
Identities = 32/95 (33%), Positives = 43/95 (45%)
Frame = +1
Query: 214 N*YKYKKHLFP*YNHLKNYYLLIHCLLIFYF*FCFTINKYKKHAFL*YNHLTNYFFYTLF 393
N K KK++F + K +Y I + + +F I K KK+ FL Y +L FF+
Sbjct: 3 NLLKLKKNVFLKHFFCKIFYTNIKTISLLFFKKKI-IQKNKKYNFLNYYYLVKLFFFFYI 61
Query: 394 TNANFI*VVKIYLYIYKLIKTFFFFCKHKWEAIIF 498
N VKI Y K F FF K K II+
Sbjct: 62 KNN-----VKIIFYWLKKY-NFKFFIKKKKNIIIY 90
>UniRef50_Q1MNT0 Cluster: NA; n=1; Lawsonia intracellularis
PHE/MN1-00|Rep: NA - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 678
Score = 35.1 bits (77), Expect = 1.9
Identities = 14/59 (23%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +1
Query: 280 IHCLLIFYF*FCFTI-NKYKKHAFL*YNHLTNYFFYTLFTNANFI*VVKIYLYIYKLIK 453
I+C++I+Y + + + NKYKK++ + + Y +Y ++ N ++ +V L+++ ++
Sbjct: 11 IYCIIIYYIKYIYLLENKYKKYSLI---YKNTYQYYNIYYNKKYLTLVIYCLFLFIFLR 66
>UniRef50_Q6ZVA9 Cluster: CDNA FLJ42813 fis, clone BRCAN2012355;
n=1; Homo sapiens|Rep: CDNA FLJ42813 fis, clone
BRCAN2012355 - Homo sapiens (Human)
Length = 180
Score = 35.1 bits (77), Expect = 1.9
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Frame = +1
Query: 250 YNHLKNY-YLLIHCLLIFYF*FCFTINKY---KKHAFL*YNHLTNYFFYTLFTNANFI*V 417
Y H+ Y+ IH + + C ++Y +KH + + H+ Y + ++T
Sbjct: 12 YTHMHMCTYVCIHIHICVHIYICMYTHRYMCTRKHMYT-HKHMYVYTYIYVYTYTYVCVH 70
Query: 418 VKIYLYIYKLIKTFFFFCKHKWEAI--IFCSILFTGGHLCEHLKRY 549
+ I ++IY + T + C H + ++T H+C H+ Y
Sbjct: 71 IHICVHIYLCMYTHTYMCAHIHMCVYTYIYVYIYTHIHICVHINMY 116
>UniRef50_A7SC42 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 218
Score = 34.7 bits (76), Expect = 2.5
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Frame = +1
Query: 226 YKKHLFP*YNHLKNYYLLIHCLLIFYF*FCFTINKYKKHAFL*YNHLTNY---FFYT-LF 393
Y HLF Y HL Y L +C +FY+ F Y H F Y HL Y F+Y LF
Sbjct: 7 YYAHLFY-YAHLFYYAHLFYCAHLFYYKHLF----YYAHLFY-YAHLFYYAHLFYYAHLF 60
Query: 394 TNANFI*VVKIYLYIYKLIKTFFFFCKH--KWEAIIFCSILFTGGHL 528
A+ ++ Y + F+ H + + + + LF HL
Sbjct: 61 YYAHLFYYAHLFYYAHLFYYAHLFYYAHLFYYAHLFYYAHLFYYAHL 107
>UniRef50_Q22SM6 Cluster: Zinc finger, C3HC4 type; n=1; Tetrahymena
thermophila SB210|Rep: Zinc finger, C3HC4 type -
Tetrahymena thermophila SB210
Length = 919
Score = 33.9 bits (74), Expect = 4.4
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = +1
Query: 250 YNHLKNYYLLIHCLLIFYF*FCFTINKYKKHAFL*YNHLTNYFFYTLFTNANFI*VVKIY 429
Y+ L+ YYL+I+ LL F F FC+ F Y + N+ + T A ++ +
Sbjct: 769 YSFLEEYYLVIYNLLEFTFSFCYPSEINVAIVFSFYYSIVNWLQIIIVTVALIFMLIALI 828
Query: 430 LYIY 441
Y++
Sbjct: 829 FYLF 832
>UniRef50_Q6ZQV8 Cluster: CDNA FLJ46861 fis, clone UTERU3011092;
n=3; Homo sapiens|Rep: CDNA FLJ46861 fis, clone
UTERU3011092 - Homo sapiens (Human)
Length = 291
Score = 33.5 bits (73), Expect = 5.8
Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +1
Query: 250 YNHLKNY-YLLIHCLLIFYF*FCFTINKYKKHAFL*YNHLTNYFFYTLFTNANF-I*VVK 423
Y H+ Y Y+ +H Y + +T F+ H+ Y ++T + + +
Sbjct: 94 YTHMHTYMYIHMHAYAYIYV-YSYTRICIHICIFI-CTHMHTYMCIHMYTCIHICVFMCT 151
Query: 424 IYLYIYKLIKTFFFFCKHKWEAIIFCSILFTGGHLCEHL 540
++ Y+Y + + C H + + C +T H+C H+
Sbjct: 152 MHAYVYSYVHMHAYVCVHMYTCVHMCIHKYTCMHMCIHM 190
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 582,756,258
Number of Sequences: 1657284
Number of extensions: 10607499
Number of successful extensions: 19879
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19738
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63381147830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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