Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31255
         (762 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.87 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   3.5  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   6.1  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.87
 Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
 Frame = +1

Query: 268 YYLLIHCLLIFYF*FCFTINKYKKHAFL*YNHLTNYFFYTLFTNANFI*VVKIYLYIYKL 447
           YY  I  L ++YF + F I        L   +     F+ L     +   +   +++  L
Sbjct: 104 YYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFL 163

Query: 448 IKTFFFFCK---HKWEAIIFCSILFTGGHL 528
           +  + FFC         +  C+ +F   HL
Sbjct: 164 LCIYHFFCAFIIFTMHLLFCCAFIFFNMHL 193


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = +1

Query: 418 VKIYLYIYKLIKTFFFFCKHKWEAI 492
           + +YL  Y +  T     +HKW  +
Sbjct: 74  ISLYLNAYHVFVTMMTLKRHKWSTL 98


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +1

Query: 343 AFL*YNHLTNYFFYTLFTNANFI*VVKIYLYIYKLIKTFFFFC 471
           AF+ +  L  Y  YT+   + F   VK YL +        FFC
Sbjct: 13  AFIIFVSLEIYHIYTVVEESGFENFVKTYL-VSDFENYVTFFC 54


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,906
Number of Sequences: 336
Number of extensions: 3285
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)