Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31255
         (762 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0075 + 591537-591618,592410-592648,592840-593037,593129-59...    29   3.1  
10_08_0972 + 21958658-21958825,21959006-21959197,21959645-219598...    28   9.3  
02_01_0724 - 5415218-5415280,5415398-5415523,5415614-5415710,541...    28   9.3  

>11_01_0075 +
           591537-591618,592410-592648,592840-593037,593129-593188,
           593313-593456,594655-594819,595611-595709,596057-596125,
           596216-596312,596922-597013,597085-597255,598053-598184,
           598479-598559,599131-599247,599344-599433
          Length = 611

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 7/35 (20%), Positives = 23/35 (65%)
 Frame = +1

Query: 382 YTLFTNANFI*VVKIYLYIYKLIKTFFFFCKHKWE 486
           + L   ++++  + ++L++  ++ +FF+F  H+W+
Sbjct: 386 FWLIARSSYLMYISLFLWLSAVVSSFFYFQLHRWK 420


>10_08_0972 +
           21958658-21958825,21959006-21959197,21959645-21959845,
           21959920-21960009,21960424-21960591,21961100-21961354,
           21961506-21961789,21961878-21962040,21962156-21962502,
           21962726-21962759
          Length = 633

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = +2

Query: 563 INRILDLTDHRWVKVLNTL 619
           INR+ D T HRW++ L TL
Sbjct: 546 INRLWDFTAHRWIEGLITL 564


>02_01_0724 -
           5415218-5415280,5415398-5415523,5415614-5415710,
           5415797-5415861,5415964-5416026,5416127-5416197,
           5416430-5416489,5416564-5416663,5416863-5416938,
           5417284-5417358,5417451-5417575,5417664-5417722,
           5418031-5418109,5418303-5418533
          Length = 429

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = +1

Query: 604 SFKHAYYLTKWTMSKTVDHYSPSSCSL*RPNLFSFDSLLG 723
           +FKH Y    WT+++ + H++ + C+L   ++F+  +L G
Sbjct: 331 NFKHLY----WTLTQQLAHHTVNGCNLRPGDMFATGTLSG 366


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,655,610
Number of Sequences: 37544
Number of extensions: 250727
Number of successful extensions: 379
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2039640244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)