Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31255
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens ...    35   0.28 
AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens ...    33   0.84 

>AK124803-1|BAC85953.1|  180|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42813 fis, clone BRCAN2012355. ).
          Length = 180

 Score = 35.1 bits (77), Expect = 0.28
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
 Frame = +1

Query: 250 YNHLKNY-YLLIHCLLIFYF*FCFTINKY---KKHAFL*YNHLTNYFFYTLFTNANFI*V 417
           Y H+    Y+ IH  +  +   C   ++Y   +KH +  + H+  Y +  ++T       
Sbjct: 12  YTHMHMCTYVCIHIHICVHIYICMYTHRYMCTRKHMYT-HKHMYVYTYIYVYTYTYVCVH 70

Query: 418 VKIYLYIYKLIKTFFFFCKHKWEAI--IFCSILFTGGHLCEHLKRY 549
           + I ++IY  + T  + C H    +       ++T  H+C H+  Y
Sbjct: 71  IHICVHIYLCMYTHTYMCAHIHMCVYTYIYVYIYTHIHICVHINMY 116


>AK128694-1|BAC87575.1|  291|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46861 fis, clone UTERU3011092. ).
          Length = 291

 Score = 33.5 bits (73), Expect = 0.84
 Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
 Frame = +1

Query: 250 YNHLKNY-YLLIHCLLIFYF*FCFTINKYKKHAFL*YNHLTNYFFYTLFTNANF-I*VVK 423
           Y H+  Y Y+ +H     Y  + +T        F+   H+  Y    ++T  +  + +  
Sbjct: 94  YTHMHTYMYIHMHAYAYIYV-YSYTRICIHICIFI-CTHMHTYMCIHMYTCIHICVFMCT 151

Query: 424 IYLYIYKLIKTFFFFCKHKWEAIIFCSILFTGGHLCEHL 540
           ++ Y+Y  +    + C H +  +  C   +T  H+C H+
Sbjct: 152 MHAYVYSYVHMHAYVCVHMYTCVHMCIHKYTCMHMCIHM 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,635,184
Number of Sequences: 237096
Number of extensions: 1566038
Number of successful extensions: 1808
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1802
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)