Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31253
         (332 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   0.48 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   0.48 
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   4.5  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    20   7.8  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   7.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 0.48
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 33  CSPSRPSKYSVRKQNRHRSCVLQAWSWECC 122
           C P RP +    ++N H    L A S  CC
Sbjct: 587 CKPCRPREQLTWRRNFHGPHRLAARSRRCC 616


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 0.48
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 33  CSPSRPSKYSVRKQNRHRSCVLQAWSWECC 122
           C P RP +    ++N H    L A S  CC
Sbjct: 479 CKPCRPREQLTWRRNFHGPHRLAARSRRCC 508


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = -2

Query: 106 HACNTQLRWRFCLR 65
           + C  +L W FC R
Sbjct: 53  YTCELKLWWEFCQR 66


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +3

Query: 102 AWSWEC 119
           AW WEC
Sbjct: 24  AWRWEC 29


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 9/29 (31%), Positives = 13/29 (44%)
 Frame = +3

Query: 27  STCSPSRPSKYSVRKQNRHRSCVLQAWSW 113
           S C+ +R +KY  R  +R       A  W
Sbjct: 369 SLCNSARSNKYPTRVPHRPYVAQYNARRW 397


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,825
Number of Sequences: 336
Number of extensions: 1879
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)