Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31253
(332 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0152 - 1168928-1169377 95 9e-21
11_01_0155 - 1287003-1287452 95 9e-21
07_03_1553 - 27653473-27653490,27653634-27653673,27653852-276539... 32 0.13
07_01_1123 - 10385215-10385574,10385676-10385810,10386385-103870... 31 0.30
11_01_0037 - 280749-281196,281418-281568,281684-281720,281831-28... 29 0.91
12_01_0786 - 7181513-7181635,7181898-7182047,7184699-7184778,718... 29 1.2
08_02_0493 - 17770723-17770758,17770772-17770996,17771051-177720... 29 1.2
04_04_0150 - 23130038-23130281,23130550-23130762,23130856-23133155 28 2.1
04_04_0236 + 23825368-23825763,23826229-23828667 27 2.8
01_01_0262 + 2130487-2130574,2130674-2131744,2131847-2131991,213... 27 2.8
07_01_1120 - 10338265-10338624,10338739-10338873,10339411-10340451 27 3.7
01_06_1332 - 36379736-36379909,36380395-36380459,36380534-363806... 27 3.7
05_07_0116 - 27785083-27786123,27786201-27786278,27786364-277869... 27 4.9
04_04_1154 - 31297628-31298020,31298150-31298300,31298389-312986... 27 4.9
01_06_1119 - 34640611-34640721,34640995-34641075,34641437-346414... 27 4.9
11_04_0467 + 18039458-18039638,18040136-18040227,18040336-180404... 26 6.4
09_04_0518 - 18261420-18261953,18262054-18262626,18262736-182629... 26 6.4
05_04_0144 + 18389877-18390431 26 6.4
04_04_0419 + 25086456-25086768,25087302-25087369,25087458-250876... 26 6.4
02_02_0366 + 9494205-9494810 26 6.4
11_04_0437 + 17720653-17720962,17721167-17721210 26 8.5
11_03_0006 + 8878611-8878724,8879323-8879706 26 8.5
10_01_0007 - 79867-79950,80258-80303,80409-80641,80765-80836,811... 26 8.5
09_06_0309 - 22206812-22206884,22207008-22207103,22207531-222076... 26 8.5
08_02_1250 - 25586442-25587023,25587141-25587827,25588389-25589492 26 8.5
>12_01_0152 - 1168928-1169377
Length = 149
Score = 95.5 bits (227), Expect = 9e-21
Identities = 45/98 (45%), Positives = 66/98 (67%)
Frame = +2
Query: 38 PIQAVQVFGT*AKPPPQLRIASVVMGMLRVNGRPLDLVEPTLLQYKLQEPILLLGKEKFS 217
P VQ FG K + G+++VNG P++L+ P +L+ K EPILL G+ +F
Sbjct: 9 PPGTVQCFGR-KKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFK 67
Query: 218 MVDIRLTVKGGGHVAQVYAIRQAISKALIALYQKYVEQ 331
+D+R+ V+GGG +Q+YAIRQAI+KAL+A YQKYV++
Sbjct: 68 DIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDE 105
>11_01_0155 - 1287003-1287452
Length = 149
Score = 95.5 bits (227), Expect = 9e-21
Identities = 45/98 (45%), Positives = 66/98 (67%)
Frame = +2
Query: 38 PIQAVQVFGT*AKPPPQLRIASVVMGMLRVNGRPLDLVEPTLLQYKLQEPILLLGKEKFS 217
P VQ FG K + G+++VNG P++L+ P +L+ K EPILL G+ +F
Sbjct: 9 PPGTVQCFGR-KKTAVAVSYCKPGRGLIKVNGVPIELIRPEMLRLKAFEPILLAGRSRFK 67
Query: 218 MVDIRLTVKGGGHVAQVYAIRQAISKALIALYQKYVEQ 331
+D+R+ V+GGG +Q+YAIRQAI+KAL+A YQKYV++
Sbjct: 68 DIDMRIRVRGGGKTSQIYAIRQAIAKALVAYYQKYVDE 105
>07_03_1553 -
27653473-27653490,27653634-27653673,27653852-27653939,
27654150-27654230,27654644-27655084,27655692-27656325
Length = 433
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +2
Query: 224 DIRLTVKGGGHVAQVYAIRQAISKAL 301
D+ TVKGGG QV AIR IS+AL
Sbjct: 347 DVTCTVKGGGVSGQVGAIRLGISRAL 372
>07_01_1123 -
10385215-10385574,10385676-10385810,10386385-10387091,
10387158-10387455
Length = 499
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1
Query: 86 AVAVLLTYRILGRPGWAARACLPAQQ 9
A+AVLLT+ +L G R C+PAQQ
Sbjct: 111 ALAVLLTHILLAHAGPVRRFCIPAQQ 136
>11_01_0037 -
280749-281196,281418-281568,281684-281720,281831-281907,
282130-282382
Length = 321
Score = 29.1 bits (62), Expect = 0.91
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = +2
Query: 29 HVQPIQAVQVFGT*AKPPPQLRIASVVMGMLRVNGRPLDLVEPTLLQY---KLQEPILLL 199
H+ ++AV G + P+L V+ ++ V G + V+ L Y K+ E ++
Sbjct: 70 HLSFVRAVDRLGGQDRATPKL-----VLQLMNVRGLSIGHVKSHLQMYRSKKIDESGQVI 124
Query: 200 GKEKFSMVDIRLTVKGGGHVAQVY 271
G E + D L ++GGGH Q Y
Sbjct: 125 GGESWRSDD-HLQMQGGGHGGQAY 147
>12_01_0786 -
7181513-7181635,7181898-7182047,7184699-7184778,
7185710-7186098,7186499-7186628,7186793-7187183
Length = 420
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = -3
Query: 111 MTTLAIRNCGGGFAYVPNTWTAWMG--CTCLPSCTAAI 4
+T A+R GGGFA V ++ +A+ CT + C++ +
Sbjct: 187 LTEYALRRAGGGFAVVQDSLSAFHDALCTTMAPCSSHV 224
>08_02_0493 -
17770723-17770758,17770772-17770996,17771051-17772033,
17772196-17772720,17772801-17772990
Length = 652
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
Frame = -3
Query: 84 GGGFAYVPNTWTAWMGC--TCLPS 19
G GFA V + W AW C CLPS
Sbjct: 60 GNGFAVVWDCWPAWRECGAGCLPS 83
>04_04_0150 - 23130038-23130281,23130550-23130762,23130856-23133155
Length = 918
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +1
Query: 10 CCAGRQARAAHPGRPSIRYVSKTATAVAYCKRGHGNAA 123
C + AR P P VS T+ AYC+ GH A
Sbjct: 263 CDSTEDARILFPELPEKDLVSWTSLIGAYCRAGHAEKA 300
>04_04_0236 + 23825368-23825763,23826229-23828667
Length = 944
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 142 QWAPVYTQHSHDHACNTQL-RWRFCLR 65
QW V+ + H+H CN ++ R+ C +
Sbjct: 265 QWEVVFVELEHNHPCNPEMVRFMMCFK 291
>01_01_0262 +
2130487-2130574,2130674-2131744,2131847-2131991,
2132873-2132944,2133330-2133398,2134173-2134241,
2134322-2134403
Length = 531
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3
Query: 63 PNTWTAWMGCTCL 25
P TW AW G TCL
Sbjct: 412 PRTWDAWEGVTCL 424
>07_01_1120 - 10338265-10338624,10338739-10338873,10339411-10340451
Length = 511
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 86 AVAVLLTYRILGRPGWAARACLPAQQ 9
A+AVL+T +L G R C+PAQQ
Sbjct: 119 ALAVLVTQILLVHAGPVRRFCIPAQQ 144
>01_06_1332 -
36379736-36379909,36380395-36380459,36380534-36380612,
36380794-36380868,36381106-36381609,36382046-36382246,
36383033-36383566
Length = 543
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -2
Query: 208 FLAEQKDRFLKFVLQQCGLNQVQWAPVYTQHSHDHACNTQL 86
F +Q+ + + QQ GLNQ Q A QH H NTQL
Sbjct: 305 FQHQQRMLLIHQLQQQSGLNQHQIAQTQQQHPH---LNTQL 342
>05_07_0116 - 27785083-27786123,27786201-27786278,27786364-27786976,
27787128-27787213,27787316-27787438,27787600-27787734,
27787930-27788019,27788796-27788981,27789560-27789661,
27789787-27789900,27790010-27790153,27790260-27790325,
27790895-27791056,27791668-27791916
Length = 1062
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +2
Query: 209 KFSMVDIRLTVKGGGHVAQVYAIRQAISKALIALYQKYV 325
KF+++ ++ + G AQ+ ++ K ++ALY+K+V
Sbjct: 1021 KFTVLKLKQELTKHGFGAQLLQLKNPNKKDIVALYEKHV 1059
>04_04_1154 -
31297628-31298020,31298150-31298300,31298389-31298620,
31298700-31298910,31299137-31299255,31299341-31299415,
31299991-31300189,31300258-31300664,31300775-31300839,
31300967-31301011,31301449-31301520,31301597-31301671,
31301912-31301983,31302178-31302249,31302525-31302596,
31302880-31302951,31303056-31303127,31304064-31304135,
31304375-31304561,31304686-31304815
Length = 930
Score = 26.6 bits (56), Expect = 4.9
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 128 NGRPLDLVEPTLLQYKLQEPILLL 199
NG PLD V+P L ++ +E I ++
Sbjct: 807 NGHPLDFVDPKLSEFNSEEVIRVI 830
>01_06_1119 -
34640611-34640721,34640995-34641075,34641437-34641496,
34641596-34641645,34641758-34641809,34642462-34642599,
34642716-34642979,34643057-34643114,34643178-34643287,
34643650-34643925
Length = 399
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 28 ARAAHPGRPSIRYVSKTATAVAYCKRGHGNAACKRAPIGL 147
A A+ P P + +S ATA++ +G+ + RAP+ L
Sbjct: 4 AMASPPACPFLLSLSAGATAISTVSAAYGSVSAPRAPLFL 43
>11_04_0467 +
18039458-18039638,18040136-18040227,18040336-18040452,
18041228-18041313,18041385-18041643,18041761-18041957,
18042181-18042213,18043371-18043862,18044236-18044299,
18045478-18045618,18045726-18045803,18047077-18047166,
18047260-18047352,18047430-18047489,18047567-18047635,
18047737-18047823,18048337-18048379,18048517-18048587,
18049050-18049143,18050335-18050447,18050909-18050998,
18051075-18051155,18052211-18052291,18052369-18052464,
18052543-18052599,18052693-18052737,18052807-18052872,
18052961-18052999
Length = 1004
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 200 GKEKFSMVDIRLTVKGGGHVAQVYAIRQAISKALIA 307
GK+ + R++V GGG+ Q+ A IS+A ++
Sbjct: 118 GKQSNELGHARISVTGGGYFHQLLAEHTIISEAFLS 153
>09_04_0518 -
18261420-18261953,18262054-18262626,18262736-18262948,
18263379-18263510,18263591-18263731,18263899-18264120
Length = 604
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 3 KWL-LCRKASTCSPSRPSKYSVRKQNRHRSCVLQAWSW 113
KWL CR+ + P P+ Y + H C + WS+
Sbjct: 36 KWLPFCRRYNI-EPRSPAAYFSESEGHHNLCSPKEWSF 72
>05_04_0144 + 18389877-18390431
Length = 184
Score = 26.2 bits (55), Expect = 6.4
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +3
Query: 39 PSRPSK-YSVRKQNRHRSCVLQAWSWEC 119
P+RP++ + + RHR C W W C
Sbjct: 20 PARPARRHGGGGRRRHRRCGGGGWRWRC 47
>04_04_0419 +
25086456-25086768,25087302-25087369,25087458-25087681,
25087929-25088012,25088593-25088806,25089252-25089428,
25089526-25089645,25089865-25089991,25090104-25090130,
25090526-25091007
Length = 611
Score = 26.2 bits (55), Expect = 6.4
Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 138 GRPFTRSIPMTTLAIRNCGGGFAYVPNTWTAWM--GCTCLPSCTAAIL 1
G P T +T A R G F Y N W AW+ G LP AIL
Sbjct: 546 GSPSTSLYHLT--ACRLPAGLFCYKANGWNAWLVTGIQFLPQRDYAIL 591
>02_02_0366 + 9494205-9494810
Length = 201
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +2
Query: 77 PPPQLRIASVVMGMLRVNGRPLDLVEPTLLQYKLQEPILLL 199
P P+LR+A + G+ L+ TL ++++EP++ +
Sbjct: 10 PSPRLRVALLACGIASAAVAAAVLLAVTLTVFRVREPVMTM 50
>11_04_0437 + 17720653-17720962,17721167-17721210
Length = 117
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +1
Query: 1 QNGCCAGRQARAAHPGRPSIRYVSKTATAVAY 96
+ G GR R G PS RY + A A A+
Sbjct: 68 RQGKKGGRGKREVQAGSPSFRYYCENAAAAAF 99
>11_03_0006 + 8878611-8878724,8879323-8879706
Length = 165
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 16 AGRQARAAHPGRPSIRYVSKTATAVAYCKR 105
AG RA HP RP+ V TA V+ R
Sbjct: 131 AGEGERAEHPPRPTCHPVQLTAIVVSVLMR 160
>10_01_0007 -
79867-79950,80258-80303,80409-80641,80765-80836,
81135-81230,81506-81607,81684-82349
Length = 432
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 236 TVKGGGHVAQVYAIRQAIS 292
TVKGGGH A Y +Q ++
Sbjct: 403 TVKGGGHTAPEYMPKQCLA 421
>09_06_0309 -
22206812-22206884,22207008-22207103,22207531-22207619,
22207738-22207820,22207932-22208048,22208132-22208319,
22208430-22208500,22208570-22208782,22210022-22210081,
22210186-22210476,22210590-22211894
Length = 861
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = -3
Query: 171 YCNSVGSTKSNGRPFTRSIPMTTLAIRNCGGG 76
YC+ V + GRP ++ ++ A+ GGG
Sbjct: 294 YCSDVRGCRVAGRPLASALSVSVYALEAEGGG 325
>08_02_1250 - 25586442-25587023,25587141-25587827,25588389-25589492
Length = 790
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 19 GRQARAAHPGRPSIRYVSKTATAVAYCKRGHGN 117
GR + A P P++ + TATA A HG+
Sbjct: 144 GRSPQPAPPSPPAVAIAATTATAAATASVIHGS 176
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,131,013
Number of Sequences: 37544
Number of extensions: 243155
Number of successful extensions: 717
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 715
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 459426840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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