Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31253
(332 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47363| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 1e-17
SB_50457| Best HMM Match : Amidase (HMM E-Value=2.6e-36) 29 0.71
SB_2591| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_3614| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_40525| Best HMM Match : Integrase_Zn (HMM E-Value=0.099) 29 1.2
SB_37094| Best HMM Match : PH (HMM E-Value=0.0005) 29 1.2
SB_43117| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-10) 28 2.2
SB_5580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.2
SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 27 2.9
SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.8
SB_28206| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_28962| Best HMM Match : F-box (HMM E-Value=6.3e-10) 27 5.0
SB_14044| Best HMM Match : EGF_CA (HMM E-Value=4.1e-13) 26 6.6
SB_7296| Best HMM Match : PHD (HMM E-Value=0.0013) 26 6.6
SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 26 6.6
SB_51984| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05) 26 8.8
SB_30048| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_22307| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_17051| Best HMM Match : Keratin_B2 (HMM E-Value=4.7) 26 8.8
SB_14587| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_1187| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 26 8.8
SB_34937| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_29619| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_13346| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_7165| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
>SB_47363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 107
Score = 85.0 bits (201), Expect = 1e-17
Identities = 37/53 (69%), Positives = 48/53 (90%)
Frame = +2
Query: 173 KLQEPILLLGKEKFSMVDIRLTVKGGGHVAQVYAIRQAISKALIALYQKYVEQ 331
K++EPILLLGKE+F VDIR+ VKGGGH +++YAIRQAISK+L+A YQKYV++
Sbjct: 11 KVEEPILLLGKERFEGVDIRVRVKGGGHTSRIYAIRQAISKSLVAYYQKYVDE 63
>SB_50457| Best HMM Match : Amidase (HMM E-Value=2.6e-36)
Length = 391
Score = 29.5 bits (63), Expect = 0.71
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 224 DIRLTVKGGGHVAQVYAIRQAISKALI 304
DI++ V GGG Q AI+ I++ALI
Sbjct: 323 DIKVNVHGGGESGQAGAIKHGITRALI 349
>SB_2591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 533
Score = 29.5 bits (63), Expect = 0.71
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 113 GMLRVNGRPLDLVEP-TLLQYKLQEPILLLGKEKFSMVDIRLTVKGGGHVAQVYAIRQAI 289
G + VN RP VE + LQ K Q + D V GGG Q AIR AI
Sbjct: 354 GKITVNDRPF--VEYFSRLQDKQQILFPFQVVDCVGQFDASCHVLGGGLTGQAGAIRLAI 411
Query: 290 SKALIALYQKYVE 328
S+AL+ + ++E
Sbjct: 412 SRALLNFSEDHLE 424
>SB_3614| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 250 PTLDCQSDVNHREFFLAEQKDRFLKFVLQQCGLNQ--VQWAP 131
P D + D R F + KDR+LK L++ G Q QW P
Sbjct: 2 PASDRRYD-RKRSFLFTQDKDRYLKAGLKKYGYGQWTAQWVP 42
>SB_40525| Best HMM Match : Integrase_Zn (HMM E-Value=0.099)
Length = 263
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Frame = -3
Query: 264 CATWPPPLTVNLMSTI----ENFSLPSKRIGS*SLYCNSVGSTKSNGRPF--TRSIPMTT 103
C T L + ST+ + F +PS R + V K NG P+ T + P+T+
Sbjct: 122 CDTHERQLHAGVSSTLTALRQKFWVPSGRFQVKRVLNKCVTCQKVNGAPYRATDAPPLTS 181
Query: 102 LAIRNCGGGF 73
L +R GGF
Sbjct: 182 LRLRESRGGF 191
>SB_37094| Best HMM Match : PH (HMM E-Value=0.0005)
Length = 1007
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/43 (41%), Positives = 23/43 (53%)
Frame = +1
Query: 196 ARQGKILYG*HQIDSQGWGPCSTSLRYQTSYFKGSDRLIPKIC 324
A Q K+L G H +D +G P S TS GSD +IP+ C
Sbjct: 298 ADQIKVLLG-HDMDGRGGSPSDKS---NTSKQTGSDLIIPQSC 336
>SB_43117| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-10)
Length = 385
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 93 VLQAWSWECCV*TGAHWTWLSPHCCSTNFRNLSFCS 200
VL + W + T +W WL CS + NL+ S
Sbjct: 244 VLAGYKWHLGLHTCRYWVWLDLLFCSASIANLAAIS 279
>SB_5580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 187
Score = 27.9 bits (59), Expect = 2.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -2
Query: 97 NTQLRWRFCLRTEYLDGLDGLHVLAFLHS 11
NT++RW+F + E LD D + +++ HS
Sbjct: 9 NTEIRWKFNAQLEDLDFADDIALISTNHS 37
>SB_35377| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1400
Score = 27.5 bits (58), Expect = 2.9
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -3
Query: 240 TVNLMSTIENFSLPSKRIGS*SLYCNSVGSTKSNGRPF--TRSIPMTTLAIRNCGGGF 73
T L + + +PS R + V K NG P+ T + P+T+L +R GGF
Sbjct: 1142 TSTLTALRQKLCVPSGRFQVKRVLNKCVTCQKVNGAPYRATDAPPLTSLRLRESRGGF 1199
>SB_53400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1130
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 2/67 (2%)
Frame = -2
Query: 250 PTLDCQSDVNH--REFFLAEQKDRFLKFVLQQCGLNQVQWAPVYTQHSHDHACNTQLRWR 77
PT D Q + F + D LK + C + + + D C + RWR
Sbjct: 562 PTCDSQKSCKYWASRGFCNTRADFMLKHCQKSCNTCEQDKLECFDR---DPRCRSWARWR 618
Query: 76 FCLRTEY 56
+C R+ Y
Sbjct: 619 YCSRSNY 625
>SB_28206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = -2
Query: 154 LNQVQWAPVYTQHSHDHACNTQLRWRFCLRTEYL 53
+N++ + + T+HS A R RFCL+T+ L
Sbjct: 30 INELVLSAITTEHSSSIAKTPSPRIRFCLKTQPL 63
>SB_28962| Best HMM Match : F-box (HMM E-Value=6.3e-10)
Length = 447
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Frame = -2
Query: 175 FVLQQCGLNQVQWAPVYTQ----HSHDHACNTQLRWRFCLRTEYLDGL 44
F + QCG + +Y + + LRW F L E L+GL
Sbjct: 258 FKMNQCGFRHILHLRIYQEIKPTAKYSSLETLDLRWNFLLSAECLEGL 305
>SB_14044| Best HMM Match : EGF_CA (HMM E-Value=4.1e-13)
Length = 184
Score = 26.2 bits (55), Expect = 6.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +1
Query: 7 GCCAGRQARAAHPGRPSIRYVSKTATAVAYCKRGHGNAACK 129
G CA R+ PG R TA+A C + + N AC+
Sbjct: 23 GGCAARRLSWVTPGFSQSRRCKTTASAKLACLQCYLNQACR 63
>SB_7296| Best HMM Match : PHD (HMM E-Value=0.0013)
Length = 873
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 144 TWLSPHCCSTNFRNLSFCSARKNSL 218
TW+ P C S+NF + S ++ NS+
Sbjct: 716 TWICPCCGSSNFSSGSIFTSSSNSI 740
>SB_25887| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1378
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = -3
Query: 216 ENFSLPSKRIGS*SLYCNSVGSTKSNGRPF--TRSIPMTTLAIRNCGGGF 73
+ +PS R + V K NG P+ T + P+T+L +R GGF
Sbjct: 1083 QKLCVPSGRFQVKRVLNKCVTCQKVNGAPYRATDAPPLTSLRLRESRGGF 1132
>SB_51984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 95 IKVRNCGGFYVYQLPKTPVCWL 116
>SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)
Length = 452
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 416 IKVRNCGGFYVYQLPKTPVCWL 437
>SB_30048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 95 IKVRNCGGFYVYQLPKTPVCWL 116
>SB_22307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 350 IKVRNCGGFYVYQLPKTPVCWL 371
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 482 IKVRNCGGFYVYQLPKTPACWL 503
>SB_17051| Best HMM Match : Keratin_B2 (HMM E-Value=4.7)
Length = 252
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 216 IKVRNCGGFYVYQLPKTPVCWL 237
>SB_14587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 50 IKVRNCGGFYVYQLPKTPVCWL 71
>SB_1187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 110 IKVRNCGGFYVYQLPKTPVCWL 131
>SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 736
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 359 IKVRNCGGFYVYQLPKTPVCWL 380
>SB_34937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 95 IKVRNCGGFYVYQLPKTPVCWL 116
>SB_29619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 216 IKVRNCGGFYVYQLPKTPVCWL 237
>SB_13346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 116 IKVRNCGGFYVYQLPKTPVCWL 137
>SB_7165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 25.8 bits (54), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 102 LAIRNCGGGFAY-VPNTWTAWM 40
+ +RNCGG + Y +P T W+
Sbjct: 140 IKVRNCGGFYVYQLPKTPVCWL 161
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,437,687
Number of Sequences: 59808
Number of extensions: 282690
Number of successful extensions: 856
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 856
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 475580678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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