Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31253
         (332 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p pro...   134   3e-32
AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA...   134   3e-32
AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p pro...    32   0.21 
AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA ...    32   0.21 
M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective chor...    29   1.5  
AY119456-1|AAM50110.1|  291|Drosophila melanogaster GH01248p pro...    27   5.9  
AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,...    27   5.9  
AE014297-3188|AAF56023.3|  291|Drosophila melanogaster CG33107-P...    27   5.9  

>AY070671-1|AAL48142.1|  148|Drosophila melanogaster RH07540p
           protein.
          Length = 148

 Score =  134 bits (323), Expect = 3e-32
 Identities = 65/102 (63%), Positives = 80/102 (78%)
 Frame = +2

Query: 26  KHVQPIQAVQVFGT*AKPPPQLRIASVVMGMLRVNGRPLDLVEPTLLQYKLQEPILLLGK 205
           K  +P+QAVQVFG   K    +       G+L+VNGRPL+ +EP +LQYKLQEP+LLLGK
Sbjct: 4   KRREPVQAVQVFGR-KKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGK 62

Query: 206 EKFSMVDIRLTVKGGGHVAQVYAIRQAISKALIALYQKYVEQ 331
           EKF+ VDIR+ V GGGHVAQ+YAIRQAISKAL+A YQKYV++
Sbjct: 63  EKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDE 104


>AE013599-3413|AAF46862.1|  148|Drosophila melanogaster CG4046-PA
           protein.
          Length = 148

 Score =  134 bits (323), Expect = 3e-32
 Identities = 65/102 (63%), Positives = 80/102 (78%)
 Frame = +2

Query: 26  KHVQPIQAVQVFGT*AKPPPQLRIASVVMGMLRVNGRPLDLVEPTLLQYKLQEPILLLGK 205
           K  +P+QAVQVFG   K    +       G+L+VNGRPL+ +EP +LQYKLQEP+LLLGK
Sbjct: 4   KRREPVQAVQVFGR-KKTATAVAYCKRGNGLLKVNGRPLEQIEPKVLQYKLQEPLLLLGK 62

Query: 206 EKFSMVDIRLTVKGGGHVAQVYAIRQAISKALIALYQKYVEQ 331
           EKF+ VDIR+ V GGGHVAQ+YAIRQAISKAL+A YQKYV++
Sbjct: 63  EKFAGVDIRVRVSGGGHVAQIYAIRQAISKALVAFYQKYVDE 104


>AY089671-1|AAL90409.1|  395|Drosophila melanogaster RH44312p
           protein.
          Length = 395

 Score = 31.9 bits (69), Expect = 0.21
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +2

Query: 113 GMLRVNGRPLDLVEPTLLQYKLQEPILLLGKEKFSMVDIRLTVKGGGHVAQVYAIRQAIS 292
           G + +NG+ +   E    + +L  P+     E    VD+   V+GGG   Q  AIR  I+
Sbjct: 291 GKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEGGGPSGQAGAIRWGIA 348

Query: 293 KAL 301
            +L
Sbjct: 349 MSL 351


>AE014297-663|AAF54157.3|  395|Drosophila melanogaster CG2957-PA
           protein.
          Length = 395

 Score = 31.9 bits (69), Expect = 0.21
 Identities = 19/63 (30%), Positives = 30/63 (47%)
 Frame = +2

Query: 113 GMLRVNGRPLDLVEPTLLQYKLQEPILLLGKEKFSMVDIRLTVKGGGHVAQVYAIRQAIS 292
           G + +NG+ +   E    + +L  P+     E    VD+   V+GGG   Q  AIR  I+
Sbjct: 291 GKISINGKDISYFEDENCREQLLFPLQF--SELLGKVDVEANVEGGGPSGQAGAIRWGIA 348

Query: 293 KAL 301
            +L
Sbjct: 349 MSL 351


>M35889-1|AAA28448.1| 1589|Drosophila melanogaster defective chorion-1
            fc177 proteinprecursor protein.
          Length = 1589

 Score = 29.1 bits (62), Expect = 1.5
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = +1

Query: 10   CCAGRQARAAHPGRPSIRYVSKTATAVAYCKRGHGNAACK 129
            C  GR  R    G  S R VS   +    CK  H N  C+
Sbjct: 1014 CLCGRSCRCGRRGLES-RVVSSRTSGTCQCKASHRNKRCE 1052


>AY119456-1|AAM50110.1|  291|Drosophila melanogaster GH01248p
           protein.
          Length = 291

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 92  RIASVVMGMLRVNGRPL-DLVEPTLLQYKLQEPILLLGKEKFSMVDI 229
           R+ + + G L +N + L DL   +++    Q   +LL KE++ MVD+
Sbjct: 55  RMMATLAGKLELNLQQLLDLFTLSIMMMTYQRDNVLLMKERYMMVDV 101


>AE014298-682|AAF45987.2| 1893|Drosophila melanogaster CG2861-PA,
            isoform A protein.
          Length = 1893

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +3

Query: 15   CRKASTCSPSRPSKYSVRKQNRHR 86
            C   STCS S  S  S R +NR R
Sbjct: 940  CSSCSTCSSSSDSSQSSRSRNRKR 963


>AE014297-3188|AAF56023.3|  291|Drosophila melanogaster CG33107-PA
           protein.
          Length = 291

 Score = 27.1 bits (57), Expect = 5.9
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +2

Query: 92  RIASVVMGMLRVNGRPL-DLVEPTLLQYKLQEPILLLGKEKFSMVDI 229
           R+ + + G L +N + L DL   +++    Q   +LL KE++ MVD+
Sbjct: 55  RMMATLAGKLELNLQQLLDLFTLSIMMMTYQRDNVLLMKERYMMVDV 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,863,870
Number of Sequences: 53049
Number of extensions: 394435
Number of successful extensions: 1149
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 735339255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)