Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31253
         (332 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   2.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   2.2  
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    20   6.8  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    20   6.8  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    20   6.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   6.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    20   9.1  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 143 DLVEPTLLQYKLQEPILLLGKEKF 214
           D+  PT+L+ +L  PIL  G + F
Sbjct: 108 DITYPTVLEVQLNLPILKDGVQIF 131


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 143 DLVEPTLLQYKLQEPILLLGKEKF 214
           D+  PT+L+ +L  PIL  G + F
Sbjct: 146 DITYPTVLEVQLNLPILKDGVQIF 169


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
          protein protein.
          Length = 138

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 9  LLCRKASTCSPSRPS 53
          +LC  A+  +P RPS
Sbjct: 6  VLCTTATLAAPQRPS 20


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -2

Query: 145 VQWAPVYTQHSHDHACNTQLRW 80
           +Q  P+Y +    H    +LRW
Sbjct: 127 IQICPIYIESFSYHKQKLRLRW 148


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -2

Query: 67  RTEYLDGLDGLHVLAFLHSSH 5
           R E L    GLH L  LH  H
Sbjct: 124 RLEQLTNQTGLHGLHGLHGLH 144


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 135 AHWTWLSPHCCSTNFRNLSF 194
           A +T ++PH  ++ F  +SF
Sbjct: 774 ALYTAMAPHATASEFDEMSF 793


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 235 QSDVNHREFFLAEQKDRFLKFVLQQ 161
           Q D+N+R   + E+    +KF L +
Sbjct: 198 QPDLNYRNSDVREEMKNIMKFWLDK 222


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,268
Number of Sequences: 438
Number of extensions: 2481
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)