Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31250
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    25   0.31 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   0.41 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   0.41 
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   0.71 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   2.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   2.9  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   3.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    20   6.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   8.7  

>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 24.6 bits (51), Expect = 0.31
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +1

Query: 223 VHA-RRGTSKDQCRSVGLRFQLNRDALYWTERRRN 324
           VH    GT+K+  R        N D  YW +RR+N
Sbjct: 111 VHGTNNGTNKNMRRLSTTTQNKNDDPSYWEKRRKN 145



 Score = 23.8 bits (49), Expect = 0.54
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = +3

Query: 141 CVF*RVIVSSSSCLRVREMNYTTSTKTCSRKTGYF*RPVSVGRSPISTQ 287
           C +  V  S S    V   +YT   K+C     Y   P+++ +  +ST+
Sbjct: 41  CQYSPVSNSDSENSEVSSNSYTPKIKSCRPFKAYIKDPLTLAQGLVSTE 89


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.2 bits (50), Expect = 0.41
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 104 VKFYIIRTYVVIVC-ILTGDCIIIIM 178
           VKFY+ + YVVI+  +LT   II ++
Sbjct: 96  VKFYVQKFYVVILAFLLTAGAIISLV 121


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 0.41
 Identities = 12/26 (46%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +2

Query: 104 VKFYIIRTYVVIVC-ILTGDCIIIIM 178
           VKFY+ + YVVI+  +LT   II ++
Sbjct: 22  VKFYVQKFYVVILAFLLTAGAIISLV 47


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 0.71
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3

Query: 156 VIVSSSSCLRVREMNYTTSTK 218
           VI  +S  LR  E+NYTT+ K
Sbjct: 627 VIAFASRSLRGPELNYTTTEK 647


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +2

Query: 98  YGVKFYIIRTYVVIVCIL 151
           +GV F +I   + I+C++
Sbjct: 604 FGVSFLLITQTIFIICVI 621


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 61  SWFYFVCLYSMKLWRKILYH*NVCC 135
           SW+Y +   +     +  Y  NVCC
Sbjct: 38  SWYYLLTNLTYNNTNRKYYWLNVCC 62


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/42 (21%), Positives = 18/42 (42%)
 Frame = -1

Query: 351 SFGLHYMHLVPSAFCPIQSIPIELKSETDRPTLVFRSTPSCV 226
           S G+    +VP   C ++    + + E D+P      +P  +
Sbjct: 250 SVGMRPECVVPEVQCAVKRKEKKAQKEKDKPNSTTNGSPDVI 291


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -2

Query: 110 ILRHNFMEYKQTK*NQLDQSTV 45
           +++HN  E+K  +   +D+ST+
Sbjct: 210 VVQHNRPEFKAARFFSIDRSTL 231


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -1

Query: 258 TLVFRSTPSCVNKSLYWSCNSSPE 187
           T ++ S+    +   YW CN+  E
Sbjct: 16  TAIYVSSRKSDSGIWYWQCNTDEE 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,917
Number of Sequences: 336
Number of extensions: 1751
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)