BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31250
(357 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY146740-1|AAO12100.1| 139|Anopheles gambiae odorant-binding pr... 25 1.1
AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding pr... 23 3.4
>AY146740-1|AAO12100.1| 139|Anopheles gambiae odorant-binding
protein AgamOBP9 protein.
Length = 139
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/33 (27%), Positives = 17/33 (51%)
Frame = +2
Query: 233 DGVLLKTSVGRSVSDFNSIGMLCIGQNADGTKC 331
D ++++ + GR ++ + C G N DG C
Sbjct: 82 DNLVVQLAHGRDANEVREEIVKCAGSNTDGNVC 114
>AY146759-1|AAO12074.1| 356|Anopheles gambiae odorant-binding
protein AgamOBP45 protein.
Length = 356
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +1
Query: 160 LYHHHHVYEFGR*ITRPVQRLVHARRGTSKDQCRSVGLRFQ 282
LY + R + + + +H RG++ DQC V L ++
Sbjct: 220 LYTRDYEQPDERYLAQETEARLHKLRGSTGDQCTEVYLAYR 260
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 383,138
Number of Sequences: 2352
Number of extensions: 7338
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26224815
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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