Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31250
         (357 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07807-1|AAA02803.1|  864|Homo sapiens dynamin protein.                28   7.4  
BC063850-1|AAH63850.1|  851|Homo sapiens dynamin 1 protein.            28   7.4  
BC050279-1|AAH50279.2|  851|Homo sapiens dynamin 1 protein.            28   7.4  
BC017226-1|AAH17226.1|  237|Homo sapiens ring finger protein 166...    28   7.4  
BC013948-1|AAH13948.1|  237|Homo sapiens ring finger protein 166...    28   7.4  
AL590708-18|CAI13837.1|  864|Homo sapiens dynamin 1 protein.           28   7.4  
AL590708-17|CAI13839.2|  851|Homo sapiens dynamin 1 protein.           28   7.4  
AB209124-1|BAD92361.1|  600|Homo sapiens dynamin 1 isoform 2 var...    28   7.4  

>L07807-1|AAA02803.1|  864|Homo sapiens dynamin protein.
          Length = 864

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -1

Query: 336 YMHLVPSAFCPIQSIPIELKSETDRPTLVFRS-TPSCVNKSLYWSCNSSPELVDMMMMIQ 160
           ++H     F   + + +E+++ETDR T   +  +P  +N  +Y     +  LVD+  M +
Sbjct: 83  FLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTK 142

Query: 159 SPV 151
            PV
Sbjct: 143 VPV 145


>BC063850-1|AAH63850.1|  851|Homo sapiens dynamin 1 protein.
          Length = 851

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -1

Query: 336 YMHLVPSAFCPIQSIPIELKSETDRPTLVFRS-TPSCVNKSLYWSCNSSPELVDMMMMIQ 160
           ++H     F   + + +E+++ETDR T   +  +P  +N  +Y     +  LVD+  M +
Sbjct: 83  FLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTK 142

Query: 159 SPV 151
            PV
Sbjct: 143 VPV 145


>BC050279-1|AAH50279.2|  851|Homo sapiens dynamin 1 protein.
          Length = 851

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -1

Query: 336 YMHLVPSAFCPIQSIPIELKSETDRPTLVFRS-TPSCVNKSLYWSCNSSPELVDMMMMIQ 160
           ++H     F   + + +E+++ETDR T   +  +P  +N  +Y     +  LVD+  M +
Sbjct: 83  FLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTK 142

Query: 159 SPV 151
            PV
Sbjct: 143 VPV 145


>BC017226-1|AAH17226.1|  237|Homo sapiens ring finger protein 166
           protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -1

Query: 324 VPSAFCPIQSIPIELKSETDRPTLVFRSTPSCVNKSLYWSCNSSPELVDMMMMIQSPVKI 145
           VPS  CP+  +P + K + D+ T V +   S   K+    CN    L  M + I S +K+
Sbjct: 64  VPSPLCPLCRLPFDPK-KVDKATHVEKQLSS--YKAPCRGCNKKVTLAKMRVHISSCLKV 120


>BC013948-1|AAH13948.1|  237|Homo sapiens ring finger protein 166
           protein.
          Length = 237

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -1

Query: 324 VPSAFCPIQSIPIELKSETDRPTLVFRSTPSCVNKSLYWSCNSSPELVDMMMMIQSPVKI 145
           VPS  CP+  +P + K + D+ T V +   S   K+    CN    L  M + I S +K+
Sbjct: 64  VPSPLCPLCRLPFDPK-KVDKATHVEKQLSS--YKAPCRGCNKKVTLAKMRVHISSCLKV 120


>AL590708-18|CAI13837.1|  864|Homo sapiens dynamin 1 protein.
          Length = 864

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -1

Query: 336 YMHLVPSAFCPIQSIPIELKSETDRPTLVFRS-TPSCVNKSLYWSCNSSPELVDMMMMIQ 160
           ++H     F   + + +E+++ETDR T   +  +P  +N  +Y     +  LVD+  M +
Sbjct: 83  FLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTK 142

Query: 159 SPV 151
            PV
Sbjct: 143 VPV 145


>AL590708-17|CAI13839.2|  851|Homo sapiens dynamin 1 protein.
          Length = 851

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -1

Query: 336 YMHLVPSAFCPIQSIPIELKSETDRPTLVFRS-TPSCVNKSLYWSCNSSPELVDMMMMIQ 160
           ++H     F   + + +E+++ETDR T   +  +P  +N  +Y     +  LVD+  M +
Sbjct: 83  FLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTK 142

Query: 159 SPV 151
            PV
Sbjct: 143 VPV 145


>AB209124-1|BAD92361.1|  600|Homo sapiens dynamin 1 isoform 2
           variant protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = -1

Query: 336 YMHLVPSAFCPIQSIPIELKSETDRPTLVFRS-TPSCVNKSLYWSCNSSPELVDMMMMIQ 160
           ++H     F   + + +E+++ETDR T   +  +P  +N  +Y     +  LVD+  M +
Sbjct: 16  FLHCKGKKFTDFEEVRLEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLVDLPGMTK 75

Query: 159 SPV 151
            PV
Sbjct: 76  VPV 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,774,987
Number of Sequences: 237096
Number of extensions: 995737
Number of successful extensions: 1958
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1958
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)