Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31250
         (357 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88184-9|ABC71833.1|  843|Caenorhabditis elegans Hypothetical pr...    27   5.1  
AF025453-10|AAK31402.3|  487|Caenorhabditis elegans Hypothetical...    27   5.1  
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr...    26   6.7  
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr...    26   6.7  
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ...    26   6.7  

>U88184-9|ABC71833.1|  843|Caenorhabditis elegans Hypothetical
           protein F36H5.3b protein.
          Length = 843

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = -1

Query: 279 KSETDRPTLVFRSTPS-CVNKSLYWSCNSSPELVDMMMMIQSPVKI 145
           ++ TDR T +F      C  K+L W       +VD  + +++ VKI
Sbjct: 772 RTSTDRVTHIFEKPEGICWTKTLNWQDMEKDFMVDDSVRVEARVKI 817


>AF025453-10|AAK31402.3|  487|Caenorhabditis elegans Hypothetical
           protein C08F1.1 protein.
          Length = 487

 Score = 26.6 bits (56), Expect = 5.1
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 270 TDRPTLVF-RSTPSCVNKSLYWSCNSSPELVDMMMMIQSPVKI 145
           TDR T +F R    C  KSL W       +VD  + I++ VK+
Sbjct: 423 TDRVTHIFERPEGICWTKSLKWEDLEKDFMVDDSVRIEARVKV 465


>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical
           protein Y48E1A.1a protein.
          Length = 1737

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 146 ILTGDCIIIIMSTSSGDELHDQYKDLFTQDGVLLKTSVGRSVSDFNSIGMLC 301
           + TG+C  +      G E+ + ++ LF  DG LL       V + N   M+C
Sbjct: 300 VRTGECDKLAWR---GAEVREHFRMLFKNDGKLLLKLFPMLVDELNGEDMIC 348


>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical
           protein Y48E1A.1a protein.
          Length = 1737

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 146 ILTGDCIIIIMSTSSGDELHDQYKDLFTQDGVLLKTSVGRSVSDFNSIGMLC 301
           + TG+C  +      G E+ + ++ LF  DG LL       V + N   M+C
Sbjct: 300 VRTGECDKLAWR---GAEVREHFRMLFKNDGKLLLKLFPMLVDELNGEDMIC 348


>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
           protein Y48E1A.1a protein.
          Length = 1737

 Score = 26.2 bits (55), Expect = 6.7
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 146 ILTGDCIIIIMSTSSGDELHDQYKDLFTQDGVLLKTSVGRSVSDFNSIGMLC 301
           + TG+C  +      G E+ + ++ LF  DG LL       V + N   M+C
Sbjct: 300 VRTGECDKLAWR---GAEVREHFRMLFKNDGKLLLKLFPMLVDELNGEDMIC 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,377,908
Number of Sequences: 27780
Number of extensions: 164388
Number of successful extensions: 503
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)