Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31250
         (357 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   1.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.1  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.1  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   5.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   5.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   5.8  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   5.8  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   5.8  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    20   7.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    20   7.6  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 194 DELHDQYKDLFTQDGVLLK 250
           +++HD YKDL  + G L K
Sbjct: 77  NKIHDAYKDLNQRYGALCK 95


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 122 RTYVVIVCILTGDCIIIIMSTSSGDELHD 208
           +TY    C+L  D +  I+S +   ELH+
Sbjct: 444 KTYERDTCLLASDALKQILSAAYNVELHN 472


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 122 RTYVVIVCILTGDCIIIIMSTSSGDELHD 208
           +TY    C+L  D +  I+S +   ELH+
Sbjct: 482 KTYERDTCLLASDALKQILSAAYNVELHN 510


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 95  NYGVKFYIIRTYVVIVCILTGDCIIIIMSTS 187
           ++ +   II + ++I+ ++   C+I I STS
Sbjct: 55  HFHIGLAIIYSMLLIMSLVGNCCVIWIFSTS 85


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -1

Query: 339 HYMHLVPSAFCPIQSIPIE 283
           H+ ++   AFC IQS   E
Sbjct: 117 HFPYVFGEAFCIIQSFAAE 135


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -3

Query: 292 PD*VEIGDRPTDTGL*KYPVLREQV 218
           P  + I D  TDT + KY + +EQV
Sbjct: 278 PPAIFIFDLTTDTLIRKYIIPKEQV 302


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +2

Query: 95  NYGVKFYIIRTYVVIVCILTGDCIIIIMSTS 187
           ++ +   II + ++I+ ++   C+I I STS
Sbjct: 55  HFHIGLAIIYSMLLIMSLVGNCCVIWIFSTS 85


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 20.6 bits (41), Expect = 5.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 192 EMNYTTSTKTCSRKTG 239
           E+N T S  TC  K G
Sbjct: 15  ELNATNSPHTCRTKNG 30


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 345 GLHYMHLVPSAFCPIQSIPIELKSETD 265
           G+HY   V S   P++    E ++E+D
Sbjct: 327 GVHYFTKVGSGEIPLEEEEWENENESD 353


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.2 bits (40), Expect = 7.6
 Identities = 7/26 (26%), Positives = 16/26 (61%)
 Frame = -2

Query: 83  KQTK*NQLDQSTVAKLKLCNLWHCRY 6
           K T+ +   +  +A +K+C++ H R+
Sbjct: 199 KPTRDHNAFEYAMAVMKMCDILHLRH 224


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,817
Number of Sequences: 438
Number of extensions: 2119
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8308335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)