Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31249
         (462 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.2  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    21   7.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.4  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    21   7.4  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   7.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   9.7  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 304 RHLKDASPVLDHAICKSYPDSSKLTTSDARP 212
           RH+K A PV+  + C     S++L      P
Sbjct: 68  RHIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 366 IPRYPW 349
           IPRYPW
Sbjct: 130 IPRYPW 135


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 366 IPRYPW 349
           IPRYPW
Sbjct: 189 IPRYPW 194


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 366 IPRYPW 349
           IPRYPW
Sbjct: 130 IPRYPW 135


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 20.6 bits (41), Expect = 7.4
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 366 IPRYPW 349
           IPRYPW
Sbjct: 189 IPRYPW 194


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 10/41 (24%), Positives = 17/41 (41%)
 Frame = +2

Query: 89   WFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDG 211
            WF  +   T IT     ++H ++  T+  M     +   DG
Sbjct: 1146 WFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDG 1186


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,080
Number of Sequences: 336
Number of extensions: 2317
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)