Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31249
         (462 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340...    27   5.6  
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907...    27   7.3  
02_05_0280 + 27435166-27435254,27436348-27436437,27436764-274368...    27   7.3  
09_02_0388 - 8450728-8450836,8451114-8451229,8451618-8451827           27   9.7  
09_02_0327 - 7284829-7284889,7284946-7286126                           27   9.7  
07_01_1190 + 11301135-11301608,11302497-11302571,11303027-113030...    27   9.7  
03_04_0042 - 16743440-16743454,16743907-16744002,16744257-167444...    27   9.7  
01_06_1128 - 34724469-34724699,34726103-34726213,34726301-347264...    27   9.7  

>03_06_0399 -
           33632811-33633107,33633236-33633385,33633705-33634029,
           33635315-33635982,33636967-33637212,33637405-33637545,
           33637807-33637856,33637943-33638060,33638304-33638910,
           33639339-33639463,33639813-33639869,33639952-33640023,
           33640100-33640232,33640305-33640428,33640522-33640576,
           33640672-33641322
          Length = 1272

 Score = 27.5 bits (58), Expect = 5.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 421 PSLDVVAVSQAPSPESNPDSPLP 353
           P LD   ++Q PSP +NP  P P
Sbjct: 55  PPLDEETLAQFPSPPTNPSPPPP 77


>04_03_0767 +
           19389337-19389381,19390586-19390643,19390720-19390759,
           19390859-19390926,19391007-19391081,19391161-19391216,
           19391317-19391361,19391450-19391701,19391787-19391881,
           19392395-19392485,19392578-19392688,19392788-19392982,
           19393071-19393262
          Length = 440

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 334 RLPWLPRVTGNQGSIPEREPEKRLPHPR 417
           ++P  P+ +  +  +P +E E+R+P PR
Sbjct: 191 KMPLPPKTSPTEPQLPPKERERRVPMPR 218


>02_05_0280 +
           27435166-27435254,27436348-27436437,27436764-27436866,
           27437318-27437377,27437745-27439148,27439227-27439328,
           27439424-27439609,27439695-27439820,27439905-27440000,
           27440509-27440574
          Length = 773

 Score = 27.1 bits (57), Expect = 7.3
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +1

Query: 142 NTCNQNSDQ*WDECFY*IKTNRRR 213
           N+ N++SDQ   +C+Y +KTNR++
Sbjct: 741 NSLNRSSDQ-ISKCYYSLKTNRKQ 763


>09_02_0388 - 8450728-8450836,8451114-8451229,8451618-8451827
          Length = 144

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 421 PSLDVVAVSQAPSPESNPDSPLPVATMVVAET 326
           PS    A + + SP   PD PLP+ +M+ + T
Sbjct: 7   PSAAAAAATSSSSPRP-PDRPLPICSMLASYT 37


>09_02_0327 - 7284829-7284889,7284946-7286126
          Length = 413

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 460 PPRTGSG*FARLL-PSLDVVAVSQAPSPESNPDSPLP 353
           PP  G   + R+    LDV + S +PSP S+ ++P P
Sbjct: 65  PPPRGRRYYRRVSGDDLDVPSCSSSPSPPSDEENPPP 101


>07_01_1190 +
           11301135-11301608,11302497-11302571,11303027-11303086,
           11304822-11304881,11304963-11305043,11305131-11305166,
           11305418-11305510
          Length = 292

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +1

Query: 334 RLPWLPRVTGNQGSIPEREPEKRLPHP 414
           + PWLP    +  S P + P   +P+P
Sbjct: 6   QFPWLPNNPTSSSSSPTKPPSPAIPNP 32


>03_04_0042 -
           16743440-16743454,16743907-16744002,16744257-16744475,
           16744830-16744910,16745092-16745187,16745981-16746045,
           16746131-16746217,16746522-16746720
          Length = 285

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 318 SMVVSATTMVATGNGESGFDSGEGA*ETATTSKE 419
           S ++   +M +T  G+ GFD  EGA      SKE
Sbjct: 227 STIIRTGSMQSTPGGDRGFDFTEGAAAKGRMSKE 260


>01_06_1128 -
           34724469-34724699,34726103-34726213,34726301-34726409,
           34726517-34726581,34726661-34726838,34726918-34726997,
           34727838-34727961,34728064-34728172,34728299-34728461
          Length = 389

 Score = 26.6 bits (56), Expect = 9.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +2

Query: 92  FLRSYSVTWITVVILELIHAIRTLTSDGMSAF 187
           F+R Y  TW  +   +L+  + TLT    S F
Sbjct: 241 FIRCYDCTWTLIDEYDLVDPVHTLTPPEESGF 272


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,535,050
Number of Sequences: 37544
Number of extensions: 282518
Number of successful extensions: 889
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 919380308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)