Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31249
(462 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 9e-06
SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 4e-04
SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.022
SB_1429| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.35
SB_27873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_10715| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0) 28 4.3
SB_48654| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_24480| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_55425| Best HMM Match : CBM_14 (HMM E-Value=7.2) 27 10.0
SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8) 27 10.0
SB_34894| Best HMM Match : F5_F8_type_C (HMM E-Value=2.2e-07) 27 10.0
SB_19601| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 10.0
SB_57570| Best HMM Match : CBM_14 (HMM E-Value=7.2) 27 10.0
SB_44421| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-29) 27 10.0
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 27 10.0
>SB_59794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 128
Score = 46.8 bits (106), Expect = 9e-06
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -3
Query: 412 DVVAVSQAPSPESNPDSPLPVATM 341
DVVAVSQAPSPESNP+SP PV TM
Sbjct: 105 DVVAVSQAPSPESNPNSPSPVVTM 128
>SB_25244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 212
Score = 41.1 bits (92), Expect = 4e-04
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -3
Query: 403 AVSQAPSPESNPDSPLPVATM 341
AVSQAPSPESNP+SP PV TM
Sbjct: 52 AVSQAPSPESNPNSPSPVVTM 72
>SB_34518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 35.5 bits (78), Expect = 0.022
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = -1
Query: 402 PFLRLPLRNRTLIPRYPW 349
PFLRLPLRNRTLI R+P+
Sbjct: 224 PFLRLPLRNRTLILRHPF 241
>SB_1429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 142
Score = 31.5 bits (68), Expect = 0.35
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3
Query: 282 GDASFKCLPYQLSMVVS 332
GD SFK LPYQLSM+++
Sbjct: 65 GDVSFKFLPYQLSMIIA 81
>SB_27873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 282 GDASFKCLPYQLSM 323
GD SFK LPYQLSM
Sbjct: 91 GDVSFKFLPYQLSM 104
>SB_10715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3
Query: 282 GDASFKCLPYQLSM 323
GD SFK LPYQLSM
Sbjct: 685 GDVSFKFLPYQLSM 698
>SB_42465| Best HMM Match : 2-oxoacid_dh (HMM E-Value=0)
Length = 441
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 421 PSLDVVAVSQAPSPESNPDSPLP 353
P+ DV+A Q P P S D PLP
Sbjct: 75 PAEDVMAAHQEPKPTSAIDQPLP 97
>SB_48654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1
Query: 361 GNQGSIPEREPEKRLPHPRKAA 426
GN+GS + E EK LP P K A
Sbjct: 52 GNEGSEGDGEKEKMLPSPEKKA 73
>SB_24480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 59 DTANGSIYQFWFLRSYSVTWITVVILELIHAIRTLTSDG 175
D NG+I F + W + LE IH + TL DG
Sbjct: 263 DFGNGTISSFTGNITRFNVWTLYISLEFIHNMATLVEDG 301
>SB_1817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1300
Score = 27.1 bits (57), Expect = 7.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 248 WITFADRMVKYRRRIFQM 301
W TF DR +KY R +F++
Sbjct: 1014 WFTFKDRQLKYYRGVFKV 1031
>SB_55425| Best HMM Match : CBM_14 (HMM E-Value=7.2)
Length = 138
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 309 YQLSMVVSATTMVATGNGESGFDS 380
+ +++ VSA T++ TG GE F++
Sbjct: 109 FLVALAVSALTLIQTGGGEGAFEA 132
>SB_45941| Best HMM Match : DUF632 (HMM E-Value=2.8)
Length = 688
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 250 PDSSKLTTSDARPSVDWF*SNKSTHPITGQS 158
PDS+ L D S +WF N S P TG +
Sbjct: 627 PDSAHLRREDTSKSAEWF--NMSFEPETGSN 655
>SB_34894| Best HMM Match : F5_F8_type_C (HMM E-Value=2.2e-07)
Length = 125
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 267 AWSSTGDASFKCLPYQLSMVVSATTMVATGNGESG 371
AWS++ D+ L L V T++ G+G+ G
Sbjct: 62 AWSASSDSKDHFLQIDLGAVYDVTSVATQGDGDRG 96
>SB_19601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 324 VVSATTMVATGNGESGFDSGEGA 392
V+SA+ + ATGN SGF+SG G+
Sbjct: 126 VISASDVRATGN--SGFESGSGS 146
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 26.6 bits (56), Expect = 10.0
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = -3
Query: 388 PSPESNPDSPLPVATMVVAETTIES**GRHLKDASPVLDHAICKSYPDSSKLTTSDARPS 209
P S+ S LP + A TT ES S V + S P S + +D PS
Sbjct: 1714 PFSTSDRSSTLPEPSTTDATTTHESVTAGEPLSTSGVSYKPL--SEPPSLESLPADEPPS 1771
Query: 208 VDWF*SNKSTHPITGQS 158
+ SN S+ PI+G +
Sbjct: 1772 ISRHLSNTSSEPISGDT 1788
>SB_57570| Best HMM Match : CBM_14 (HMM E-Value=7.2)
Length = 82
Score = 26.6 bits (56), Expect = 10.0
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 309 YQLSMVVSATTMVATGNGESGFDS 380
+ +++ VSA T++ TG GE F++
Sbjct: 53 FLVALAVSALTLIQTGGGEGAFEA 76
>SB_44421| Best HMM Match : F5_F8_type_C (HMM E-Value=1.1e-29)
Length = 642
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 267 AWSSTGDASFKCLPYQLSMVVSATTMVATGNGESG 371
AWS++ D+ L L V T++ G+G+ G
Sbjct: 205 AWSASSDSKDHFLQIDLGAVYDVTSVATQGDGDRG 239
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 26.6 bits (56), Expect = 10.0
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 20 IKPCMSQCKPY*GDTANGSIYQFWFLRSYSVTWITVVILELIHAIR-TLTSDGMSAFIRS 196
+KPC S P + +++ +VT+ V + IH R TL+SD M A S
Sbjct: 35 LKPCSSNYAP---SEQSYNVFLAPLYTRATVTYKGPVQSQGIHLNRYTLSSDNMKANNIS 91
Query: 197 KPIDG 211
+P+DG
Sbjct: 92 RPLDG 96
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,194,471
Number of Sequences: 59808
Number of extensions: 300717
Number of successful extensions: 864
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 945255773
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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