Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31248
         (479 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    37   8e-05
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    33   0.002
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   5.9  
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    21   7.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.8  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   7.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 37.1 bits (82), Expect = 8e-05
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 13/64 (20%)
 Frame = +2

Query: 74  PSRLMLPKGTYDGFPFQLFVFVYPY---------EPTPKESEPFKSVG----PDNKPFGY 214
           P  ++LPKGT  G+P  LFV +  Y           T  + + F  +     PD +  GY
Sbjct: 582 PQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSMGY 641

Query: 215 PFDR 226
           PFDR
Sbjct: 642 PFDR 645


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 32.7 bits (71), Expect = 0.002
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
 Frame = +2

Query: 74  PSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEP---FKSVG----------PDNKPFGY 214
           P  +++PKGT +G   QLFV +  Y+    +          G          PD +  GY
Sbjct: 583 PQHMLIPKGTPEGMKSQLFVMISNYDDDKIDQSTEGVCNDAGSYCGIKDKLYPDRRSMGY 642

Query: 215 PFDR 226
           PFDR
Sbjct: 643 PFDR 646


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +3

Query: 237 LSTSNNLTCSSRKAWATMKENYSPIYLTFLTIHQIKRNYNA 359
           L   N +T     +WA +    SP+Y + L     + N NA
Sbjct: 193 LDVINVMTYDFHGSWAGVTAQNSPLYASPLDGEWQRDNLNA 233


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 96  RVHTMDSPSSCLY 134
           R HT + P SC Y
Sbjct: 28  RTHTGEKPFSCTY 40


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 456 LLIYDISTRFYIFT*DSTV 400
           L+ ++IST  Y++T  ST+
Sbjct: 26  LIEFNISTSNYLYTPSSTI 44


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 456 LLIYDISTRFYIFT*DSTV 400
           L+ ++IST  Y++T  ST+
Sbjct: 26  LIEFNISTSNYLYTPSSTI 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,174
Number of Sequences: 336
Number of extensions: 2599
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)