Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31247
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0486 - 3455030-3455770 32 0.11
02_05_0982 - 33303500-33304011,33304091-33304208,33304606-333047... 28 1.3
02_05_0975 + 33227431-33227730,33228556-33228636,33228883-332296... 28 1.3
03_05_0393 - 23754652-23754768,23754868-23755437 28 1.7
01_01_1155 + 9191249-9192439 28 1.7
11_04_0053 - 12881524-12881592,12882481-12882546,12882647-128828... 27 3.0
01_01_0749 - 5794140-5794346,5795445-5795558,5795856-5796008,579... 27 3.0
02_05_0510 + 29637160-29637506,29637714-29637775,29638047-296381... 27 4.0
07_03_1432 - 26508135-26508881,26509301-26509708 26 5.2
07_01_0139 - 1014952-1015165,1015271-1015350,1015420-1015629,101... 26 6.9
04_03_0893 - 20602008-20602361,20602455-20602604,20602723-206028... 26 6.9
01_06_1794 - 39919363-39920025 26 6.9
01_05_0465 + 22485728-22485835,22486125-22486955 26 6.9
12_02_0507 + 19810446-19811048,19811220-19811466,19811590-198121... 25 9.2
11_01_0682 - 5575297-5575308,5575391-5575516,5575779-5575885,557... 25 9.2
11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196 25 9.2
05_03_0229 - 10675643-10675810,10676314-10676419,10676684-106767... 25 9.2
04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789 25 9.2
04_03_0101 - 11242252-11243295,11243607-11244131,11244208-112445... 25 9.2
03_02_0548 - 9392048-9392501,9392596-9392939 25 9.2
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.9 bits (69), Expect = 0.11
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = -2
Query: 256 PPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASP 119
PP T P+ PS Y P Y+P T +IP +PP V +P
Sbjct: 86 PPPTPPYVPSPPPYV--PPYIPPPTPPYVPPYIPPPTPPYVPPPTP 129
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -2
Query: 256 PPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNT 128
PP T P+ P + P Y+P T ++P SPP T
Sbjct: 117 PPPTPPYVPPPTPPS-PPPYVPPPTPPSPPPYVPPPSPPATKT 158
>02_05_0982 -
33303500-33304011,33304091-33304208,33304606-33304726,
33304811-33304877,33304968-33305102,33305186-33305297,
33305852-33306009,33306177-33306300,33306406-33306542,
33307284-33307403,33307878-33308025,33308674-33308931,
33309090-33309127,33309232-33309674,33309761-33309845,
33310063-33310123,33310277-33310453,33311611-33312408,
33314394-33314693
Length = 1303
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 225 REGYQGMVDGGDNIEEANWSSVSSIIHK 308
+ GY+ V G+ EEA W++V IHK
Sbjct: 21 KRGYREAVAEGNREEEARWANVIGDIHK 48
>02_05_0975 +
33227431-33227730,33228556-33228636,33228883-33229680,
33230829-33231005,33231159-33231274,33231422-33231520,
33231598-33232040,33232147-33232184,33232343-33232600,
33233378-33233525,33233989-33234108,33234884-33234984,
33235090-33235213,33235386-33235498,33236103-33236214,
33236298-33236432,33236527-33236593,33236685-33236741,
33236774-33236900,33237221-33237338,33237418-33237929
Length = 1347
Score = 28.3 bits (60), Expect = 1.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 225 REGYQGMVDGGDNIEEANWSSVSSIIHK 308
+ GY+ V G+ EEA W++V IHK
Sbjct: 21 KRGYREAVAEGNREEEARWANVIGDIHK 48
>03_05_0393 - 23754652-23754768,23754868-23755437
Length = 228
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 219 FIREGYQGMVDGGDNIEEANWSSVS 293
++R Y +VD D + E NWSS++
Sbjct: 140 YVRSEYLNLVDDIDKMRELNWSSLT 164
>01_01_1155 + 9191249-9192439
Length = 396
Score = 27.9 bits (59), Expect = 1.7
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 72 GSATQKFIGRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGI 197
G A + +G+GSH +A GGD G + VV + +
Sbjct: 15 GFAAKNLVGKGSHGNVYVARLVCGGDGGGGRVRKKKVVVVAV 56
>11_04_0053 -
12881524-12881592,12882481-12882546,12882647-12882808,
12883123-12883266,12883975-12884145,12884265-12884333,
12884899-12885054,12887398-12887673
Length = 370
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 222 IREGYQGMVDGGDNIEEANWSSVSSIIH 305
I++ QG +G DNIE AN S + H
Sbjct: 292 IKDVMQGKAEGADNIENANAGPDSKLNH 319
>01_01_0749 -
5794140-5794346,5795445-5795558,5795856-5796008,
5796124-5796207,5796262-5796399,5796500-5796598
Length = 264
Score = 27.1 bits (57), Expect = 3.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 184 TTDRTAAFIP*ESPPLVNTASPLPL*EPR 98
TT TA P P ++ ASPLPL PR
Sbjct: 106 TTGATATATPAAGVPALHRASPLPLFVPR 134
>02_05_0510 +
29637160-29637506,29637714-29637775,29638047-29638161,
29638296-29638419,29638604-29638684,29639122-29639463,
29639562-29639728,29639810-29640639,29641103-29642568
Length = 1177
Score = 26.6 bits (56), Expect = 4.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -3
Query: 252 HLPCPGILHE*NILYTLSICPYARLIAQRHSFPENLH 142
HLPCP ++ + + + S C + + AQ N H
Sbjct: 627 HLPCPVMIDKLEVQFNQSDCNFVIVSAQEDCSASNSH 663
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 26.2 bits (55), Expect = 5.2
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 253 PSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASPLP 113
PST P YP + P P+ + T P +PP ASP P
Sbjct: 42 PSTPPTYPP--PSSTPPSLAPVSPSPPTTYLPPSPTPPSPAPASPSP 86
>07_01_0139 -
1014952-1015165,1015271-1015350,1015420-1015629,
1015925-1016044,1016650-1016709,1017129-1017204,
1018189-1018352,1018428-1018490,1018815-1018902,
1018997-1019647,1019965-1020449
Length = 736
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = -2
Query: 208 HPKYMPIRTTDRTAAF-IP*ESPPLVNTAS-----PLPL*EPRPINF*VADP 71
HP +PI + +A F + PP TA+ PLPL P+P+ ++P
Sbjct: 102 HPVSIPIARSASSAEFRAVHQPPPRAATAASPVLLPLPLPSPKPVESDTSEP 153
>04_03_0893 -
20602008-20602361,20602455-20602604,20602723-20602835,
20603105-20603377,20603746-20603886,20604638-20604974
Length = 455
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 37 LRTTIF*LPRWTGQLLRNLLAAALIKARGLL 129
L TTIF +P W G+ L L A L K L
Sbjct: 219 LCTTIFVMPVWAGEDLHKLAAGNLDKLADFL 249
>01_06_1794 - 39919363-39920025
Length = 220
Score = 25.8 bits (54), Expect = 6.9
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 96 GRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGD 260
G G + G G + GG ++ R +Y+ + + G G DGGD
Sbjct: 127 GGGGYTGGGSVPYGGGGGVPAGYWTPQNGARSPLYINTREVHVYGGPHGPYDGGD 181
>01_05_0465 + 22485728-22485835,22486125-22486955
Length = 312
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +3
Query: 243 MVDGGDNIEEANWSSVSSIIHK 308
+VDGGD ++A+W + I H+
Sbjct: 85 LVDGGDLADQADWEATYFIQHR 106
>12_02_0507 +
19810446-19811048,19811220-19811466,19811590-19812125,
19812397-19813620
Length = 869
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 96 GRGSHKGKGLAVFTSGGDSQGMNAAV 173
GRG +G+G+++ G +GM V
Sbjct: 109 GRGGGRGRGMSLTNGAGSGRGMRGFV 134
>11_01_0682 -
5575297-5575308,5575391-5575516,5575779-5575885,
5575911-5576013,5576122-5576187,5576378-5576461,
5577448-5577522,5577615-5577668,5577752-5577895,
5578632-5578685,5578877-5578981,5579076-5579173,
5579660-5579729,5580444-5580566,5580647-5580727,
5580996-5581476,5581684-5581816,5582550-5582598,
5582704-5582892,5583642-5583703,5583762-5585316
Length = 1256
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 175 RTAAFIP*ESPPLVNTASPLPL*EPR 98
+ AA + E PPLV A P P+ PR
Sbjct: 148 QAAATVQGEWPPLVRPAPPSPIASPR 173
>11_01_0638 + 5106962-5107553,5108107-5108303,5108955-5110196
Length = 676
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 96 GRGSHKGKGLAVFTSGGDSQGMNAAV 173
GRG +G+G ++ S G +GM V
Sbjct: 109 GRGGGRGRGRSLTNSAGSGRGMGGFV 134
>05_03_0229 -
10675643-10675810,10676314-10676419,10676684-10676730,
10676774-10676806
Length = 117
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -2
Query: 301 IIELTEDQFASSMLSPPSTMPWYP 230
++ LT +++ L P+T+ WYP
Sbjct: 33 VVPLTATRYSIDALGLPTTVSWYP 56
>04_03_0383 + 15179587-15180162,15180334-15181149,15181548-15182789
Length = 877
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 96 GRGSHKGKGLAVFTSGGDSQGMNAAV 173
GRG +G+G ++ G S+GM V
Sbjct: 100 GRGGGRGRGRSLTNGAGSSRGMRGFV 125
>04_03_0101 -
11242252-11243295,11243607-11244131,11244208-11244513,
11244692-11245231
Length = 804
Score = 25.4 bits (53), Expect = 9.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 96 GRGSHKGKGLAVFTSGGDSQGMNAAV 173
GRG +G+G+++ G +GM V
Sbjct: 88 GRGGGRGRGMSLTNGAGSGRGMRGFV 113
>03_02_0548 - 9392048-9392501,9392596-9392939
Length = 265
Score = 25.4 bits (53), Expect = 9.2
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -2
Query: 226 RIKYTLHPKYMPIRTTDRTA 167
R++Y ++P Y P+ T+ R+A
Sbjct: 232 RVRYEIYPFYFPLATSARSA 251
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,300,246
Number of Sequences: 37544
Number of extensions: 172175
Number of successful extensions: 443
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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