Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31247
         (308 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   3.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    23   3.4  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    22   4.5  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    22   4.5  
Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.            21   7.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            21   7.9  

>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -1

Query: 263 VITSIYHALVSFTNKIYFTP 204
           V+T++  A++ +T K+ +TP
Sbjct: 133 VVTTLTKAILHYTGKVIWTP 152


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -2

Query: 226 RIKYTLHPKYMPIRTTDRTAAFI 158
           R++YT H KY+  R    T A +
Sbjct: 724 RLEYTQHIKYVAERAVTNTNALV 746


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 44  LQYFDYHDGRVSYSEIY 94
           LQ FDYHD     S +Y
Sbjct: 563 LQTFDYHDEGGETSSVY 579


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 44  LQYFDYHDGRVSYSEIY 94
           LQ FDYHD     S +Y
Sbjct: 564 LQTFDYHDEGGETSSVY 580


>Z69982-1|CAA93822.1|  143|Anopheles gambiae lectin protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/31 (25%), Positives = 18/31 (58%)
 Frame = -2

Query: 292 LTEDQFASSMLSPPSTMPWYPSRIKYTLHPK 200
           +T DQF  ++ + P+T P   + +  ++ P+
Sbjct: 33  MTHDQFNINLQTGPNTNPRDDTALHISIRPR 63


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 272  FFNVITSIYHALVSFT 225
            F+N I +I+  ++SFT
Sbjct: 2805 FYNTIGTIHQTVISFT 2820


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 314,677
Number of Sequences: 2352
Number of extensions: 6127
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 19884282
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)