Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31247
         (308 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098505-2|AAC67416.2|  814|Caenorhabditis elegans Hypothetical ...   103   3e-23
Z70750-2|CAA94737.1|  756|Caenorhabditis elegans Hypothetical pr...    78   1e-15
AF098505-3|AAL27269.2|  578|Caenorhabditis elegans Hypothetical ...    52   1e-07
Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical pr...    27   2.0  
Z81107-11|CAJ90502.1|  476|Caenorhabditis elegans Hypothetical p...    27   3.5  
Z81107-10|CAB03233.1|  646|Caenorhabditis elegans Hypothetical p...    27   3.5  
Z73103-12|CAJ90500.1|  476|Caenorhabditis elegans Hypothetical p...    27   3.5  
Z73103-11|CAA97431.1|  646|Caenorhabditis elegans Hypothetical p...    27   3.5  
Z81592-8|CAB04730.1|  365|Caenorhabditis elegans Hypothetical pr...    25   8.1  
AC024859-12|AAK29966.1|  477|Caenorhabditis elegans Hypothetical...    25   8.1  

>AF098505-2|AAC67416.2|  814|Caenorhabditis elegans Hypothetical
           protein Y71H10A.1a protein.
          Length = 814

 Score =  103 bits (247), Expect = 3e-23
 Identities = 44/66 (66%), Positives = 56/66 (84%)
 Frame = +3

Query: 111 KGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSV 290
           KG+ LA++TSGGDSQGMN+AVRS+ RM IY GCKVY I EGY+GM++GGD I+EA W++V
Sbjct: 44  KGRTLAIYTSGGDSQGMNSAVRSITRMAIYCGCKVYLIYEGYEGMIEGGDFIKEATWNTV 103

Query: 291 SSIIHK 308
           S II +
Sbjct: 104 SDIIQQ 109



 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 24/58 (41%), Positives = 37/58 (63%)
 Frame = +3

Query: 123 LAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSS 296
           +AV   G  + GMNAAVRS VRM +Y  C VY I + ++G+ +G  + ++  WS V++
Sbjct: 437 VAVINVGAPAGGMNAAVRSYVRMALYHQCTVYGIEDSFEGLANG--SFKQFKWSDVTN 492


>Z70750-2|CAA94737.1|  756|Caenorhabditis elegans Hypothetical
           protein C50F4.2 protein.
          Length = 756

 Score = 77.8 bits (183), Expect = 1e-15
 Identities = 38/65 (58%), Positives = 47/65 (72%)
 Frame = +3

Query: 111 KGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSV 290
           K  G+ V TSGGDSQGMNAAVRSVVR  I  G + Y IREGY G+++G  NIE A W+ V
Sbjct: 9   KDHGVGVLTSGGDSQGMNAAVRSVVRETIRQGHRCYLIREGYNGLING--NIELAKWAHV 66

Query: 291 SSIIH 305
           +++ H
Sbjct: 67  ANVTH 71


>AF098505-3|AAL27269.2|  578|Caenorhabditis elegans Hypothetical
           protein Y71H10A.1b protein.
          Length = 578

 Score = 51.6 bits (118), Expect = 1e-07
 Identities = 24/58 (41%), Positives = 37/58 (63%)
 Frame = +3

Query: 123 LAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEEANWSSVSS 296
           +AV   G  + GMNAAVRS VRM +Y  C VY I + ++G+ +G  + ++  WS V++
Sbjct: 234 VAVINVGAPAGGMNAAVRSYVRMALYHQCTVYGIEDSFEGLANG--SFKQFKWSDVTN 289


>Z84574-5|CAB06541.1|  846|Caenorhabditis elegans Hypothetical
           protein F33E2.6 protein.
          Length = 846

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = -2

Query: 256 PPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASPL 116
           PP T P  P     T  P  +P     ++  F P   PP VN   PL
Sbjct: 412 PPKTTP--PKTEPPTTEPPNIPYCWQQQSRLFAPSPPPPRVNNTMPL 456


>Z81107-11|CAJ90502.1|  476|Caenorhabditis elegans Hypothetical
           protein R07H5.2b protein.
          Length = 476

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 292 LTEDQFASSMLSPPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFI 158
           L  D    + LSP S M        Y+L+ +++P   +  TAAF+
Sbjct: 275 LNRDLIKKTKLSPDSVMQLAIQMAFYSLYKEFVPTYESCSTAAFL 319


>Z81107-10|CAB03233.1|  646|Caenorhabditis elegans Hypothetical
           protein R07H5.2a protein.
          Length = 646

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 292 LTEDQFASSMLSPPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFI 158
           L  D    + LSP S M        Y+L+ +++P   +  TAAF+
Sbjct: 445 LNRDLIKKTKLSPDSVMQLAIQMAFYSLYKEFVPTYESCSTAAFL 489


>Z73103-12|CAJ90500.1|  476|Caenorhabditis elegans Hypothetical
           protein R07H5.2b protein.
          Length = 476

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 292 LTEDQFASSMLSPPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFI 158
           L  D    + LSP S M        Y+L+ +++P   +  TAAF+
Sbjct: 275 LNRDLIKKTKLSPDSVMQLAIQMAFYSLYKEFVPTYESCSTAAFL 319


>Z73103-11|CAA97431.1|  646|Caenorhabditis elegans Hypothetical
           protein R07H5.2a protein.
          Length = 646

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = -2

Query: 292 LTEDQFASSMLSPPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFI 158
           L  D    + LSP S M        Y+L+ +++P   +  TAAF+
Sbjct: 445 LNRDLIKKTKLSPDSVMQLAIQMAFYSLYKEFVPTYESCSTAAFL 489


>Z81592-8|CAB04730.1|  365|Caenorhabditis elegans Hypothetical
           protein T16G1.8 protein.
          Length = 365

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 17/55 (30%), Positives = 23/55 (41%)
 Frame = -2

Query: 274 ASSMLSPPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASPLPL 110
           A SM  PP  +P  PS +     P Y    +      F P  +P  V  A P+P+
Sbjct: 102 AYSMAPPPLILPSSPSYVAPVSAPSYSLTPSISIPGPFPP--APLYVPPAPPMPI 154


>AC024859-12|AAK29966.1|  477|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.16 protein.
          Length = 477

 Score = 25.4 bits (53), Expect = 8.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +3

Query: 96  GRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYF 221
           G G   G GL+     G  QG+   +  ++  G+ LG K+ F
Sbjct: 317 GLGLGLGSGLSHMIGCGSGQGLGIGLGLILGTGLGLGLKLGF 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,764,940
Number of Sequences: 27780
Number of extensions: 131949
Number of successful extensions: 335
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 334
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 333802358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)