Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31247
(308 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g29180.1 68416.m03657 expressed protein 31 0.21
At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repe... 30 0.28
At5g14230.1 68418.m01663 ankyrin repeat family protein contains ... 29 0.64
At5g23170.1 68418.m02710 protein kinase family protein contains ... 29 0.84
At3g58020.1 68416.m06466 DNAJ heat shock N-terminal domain-conta... 28 1.1
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 27 1.9
At5g51500.1 68418.m06387 pectinesterase family protein contains ... 27 2.6
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 27 2.6
At5g53740.1 68418.m06678 hypothetical protein 27 3.4
At2g44470.1 68415.m05529 glycosyl hydrolase family 1 protein con... 27 3.4
At2g21235.1 68415.m02522 bZIP protein-related similar to VirE2-i... 27 3.4
At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein / c... 26 5.9
At4g36270.1 68417.m05158 ATP-binding region, ATPase-like domain-... 26 5.9
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 26 5.9
At5g51490.1 68418.m06386 pectinesterase family protein contains ... 25 7.8
At3g29240.2 68416.m03669 expressed protein similar to At1g33780 ... 25 7.8
At3g29240.1 68416.m03668 expressed protein similar to At1g33780 ... 25 7.8
>At3g29180.1 68416.m03657 expressed protein
Length = 513
Score = 30.7 bits (66), Expect = 0.21
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 39 EDYNILITTMDGSATQKFIGRGSHKG-KGLAVFTSGGDSQGMNAA 170
E+Y+ +DGS +KF+ +G +K GL+V T + M+ A
Sbjct: 117 EEYHETYLKIDGSKAEKFVSKGMYKDPSGLSVLTGNNKKKLMDHA 161
>At1g54710.1 68414.m06237 expressed protein contains 3 WD-40 repeats
(PF00400) (1 weak) submitForm();
Length = 927
Score = 30.3 bits (65), Expect = 0.28
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 301 IIELTEDQFASSMLSPPSTMPWYPSRIKYTLHPKYMP 191
++E+ QF L+P ++PW+ S T H Y P
Sbjct: 480 VLEIRNSQFDGPTLAPTLSLPWWSSPSFMTTHFSYPP 516
>At5g14230.1 68418.m01663 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 591
Score = 29.1 bits (62), Expect = 0.64
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 66 MDGSATQKFI--GRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQ 239
++GS+ K G+G GKGL + S G + R+VV + +G F R+ +
Sbjct: 477 IEGSSVMKHTKGGKGKKHGKGLRMLESSGVLSWGKSRKRTVVCKEVEIGMSQRF-RKNRK 535
Query: 240 GMVDGGD 260
G DG +
Sbjct: 536 GKGDGAE 542
>At5g23170.1 68418.m02710 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 341
Score = 28.7 bits (61), Expect = 0.84
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 42 DYNILITTMDGSATQKFIGRGSH 110
DY+ L+T +D + K IG+GSH
Sbjct: 5 DYDKLVTAIDRFSPSKLIGKGSH 27
>At3g58020.1 68416.m06466 DNAJ heat shock N-terminal
domain-containing protein contains Pfam profile PF00226
DnaJ domain
Length = 580
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 96 GRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKV 215
GRG H G +F GG S N+A MG+ + C V
Sbjct: 36 GRGGHGRGGGGIFFFGGGSHHRNSASVDGSNMGLTVTCLV 75
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 27.5 bits (58), Expect = 1.9
Identities = 15/54 (27%), Positives = 20/54 (37%)
Frame = -2
Query: 256 PPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASPLPL*EPRP 95
PP+ P P HPK ++ + P PP V P P +P P
Sbjct: 57 PPAVKPPTPKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHP 110
>At5g51500.1 68418.m06387 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 540
Score = 27.1 bits (57), Expect = 2.6
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 117 KGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQ 239
KG+A + G ++G A+RS + I+ C + EGYQ
Sbjct: 318 KGIAFQNTAGPAKGQAVALRSSSDLSIFYRCSI----EGYQ 354
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +3
Query: 105 SHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIR--EGYQGMVDGGDNI 266
SH G G GGD++ M A ++ G G K Y IR E +VD + I
Sbjct: 3 SHGGGGGVSNGGGGDAERMLAQAEKLLLSGDLNGSKTYAIRACEADHSLVDHAELI 58
>At5g53740.1 68418.m06678 hypothetical protein
Length = 275
Score = 26.6 bits (56), Expect = 3.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 174 RSVVRMGIYLGCKVYFIREGYQGMVDGGDNIEE 272
R++V + L + +FI +G G DGG+ +E
Sbjct: 229 RTIVAVNHALAARSWFINQGEDGASDGGNENDE 261
>At2g44470.1 68415.m05529 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to anther-specific protein ATA27 (GI:2746341)
[Arabidopsis thaliana]
Length = 451
Score = 26.6 bits (56), Expect = 3.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 253 PSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTA 125
P + W+ + + Y +P+ M +R AF P +S L+N++
Sbjct: 291 PLELEWHLNPVIYGDYPETMKKHVGNRLPAFTPEQSKMLINSS 333
>At2g21235.1 68415.m02522 bZIP protein-related similar to
VirE2-interacting protein VIP1 [Arabidopsis thaliana]
GI:7258340, tbZIP transcription factor [Arabidopsis
thaliana] GI:17065884
Length = 550
Score = 26.6 bits (56), Expect = 3.4
Identities = 19/70 (27%), Positives = 30/70 (42%)
Frame = -1
Query: 296 RANRRPVRFFNVITSIYHALVSFTNKIYFTP*VYAHTHD*SHSGIHSLRISTASKHSKPL 117
R +P F+ T +L SF N FTP S S IH + + +S H+
Sbjct: 53 RCTTQPSPTFSDFTQASPSLTSFNNPASFTP-------SFSFSNIHQMIPTPSSSHNSKA 105
Query: 116 AFMRAAANKF 87
+ A+++ F
Sbjct: 106 SVSSASSSSF 115
>At5g17500.1 68418.m02053 glycosyl hydrolase family 5 protein /
cellulase family protein predicted protein F3F19.15 -
Arabidopsis thaliana, EMBL:AC007357
Length = 526
Score = 25.8 bits (54), Expect = 5.9
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +3
Query: 213 VYFIREGYQGMVDGGDNIEEANWSSV 290
VY+ REG +G+V+ + +ANW +V
Sbjct: 351 VYYFREGKRGVVEAYGML-DANWHNV 375
>At4g36270.1 68417.m05158 ATP-binding region, ATPase-like
domain-containing protein low similarity to microrchidia
[Mus musculus] GI:5410255; contains Pfam profile
PF02518: ATPase, histidine kinase-, DNA gyrase B-, and
HSP90-like domain protein
Length = 625
Score = 25.8 bits (54), Expect = 5.9
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = -2
Query: 196 MPIRTTDRTAAFIP*ESPPLVNTASPLPL 110
MP + R A IP + PP VNT +PLPL
Sbjct: 464 MPADKSKRIA--IP-DQPPTVNTFNPLPL 489
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 25.8 bits (54), Expect = 5.9
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = -2
Query: 277 FASSMLSPPSTMPWYPSRIKYTLHPKYMPIRTTDRTAAFIP*ESPPLVNTASPLPL*EPR 98
F+ S PP +P + +R T + PI T P PPL + + P PL +P
Sbjct: 541 FSPSQPPPPPPLPSFSNRDPLTT--LHQPINKTPPPP---PPPPPPLPSRSIPPPLAQPP 595
Query: 97 P 95
P
Sbjct: 596 P 596
>At5g51490.1 68418.m06386 pectinesterase family protein contains
Pfam profile: PF01095 pectinesterase
Length = 536
Score = 25.4 bits (53), Expect = 7.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3
Query: 117 KGLAVFTSGGDSQGMNAAVRSVVRMGIYLGCKVYFIREGYQ 239
KG+ + G ++G A+RS + I+ C + EGYQ
Sbjct: 314 KGITFRNTAGPAKGQAVALRSSSDLSIFYKCSI----EGYQ 350
>At3g29240.2 68416.m03669 expressed protein similar to At1g33780
[Arabidopsis thaliana]; contains Pfam profile PF02622:
Uncharacterized ACR, COG1678
Length = 317
Score = 25.4 bits (53), Expect = 7.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 27 LFIIEDYNILITTMDGSATQK--FIGRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIY 200
L I++ I M G+ + K F G +G L SGGD++ + V V G+Y
Sbjct: 174 LMSIKETKSTILDMAGTFSDKRLFFGGPLEEGLFLVSPRSGGDNEVGKSGVFRQVMKGLY 233
Query: 201 LGCK 212
G +
Sbjct: 234 YGTR 237
>At3g29240.1 68416.m03668 expressed protein similar to At1g33780
[Arabidopsis thaliana]; contains Pfam profile PF02622:
Uncharacterized ACR, COG1678
Length = 317
Score = 25.4 bits (53), Expect = 7.8
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +3
Query: 27 LFIIEDYNILITTMDGSATQK--FIGRGSHKGKGLAVFTSGGDSQGMNAAVRSVVRMGIY 200
L I++ I M G+ + K F G +G L SGGD++ + V V G+Y
Sbjct: 174 LMSIKETKSTILDMAGTFSDKRLFFGGPLEEGLFLVSPRSGGDNEVGKSGVFRQVMKGLY 233
Query: 201 LGCK 212
G +
Sbjct: 234 YGTR 237
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,441,615
Number of Sequences: 28952
Number of extensions: 129221
Number of successful extensions: 316
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 316
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 321405440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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