Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31245
(591 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 36 0.14
Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein. 33 0.76
AK127398-1|BAC86959.1| 719|Homo sapiens protein ( Homo sapiens ... 31 3.0
BC045743-1|AAH45743.1| 400|Homo sapiens ring finger protein 149... 30 5.3
BC032328-1|AAH32328.2| 400|Homo sapiens ring finger protein 149... 30 5.3
BC019355-1|AAH19355.2| 400|Homo sapiens ring finger protein 149... 30 5.3
AY450390-1|AAR21083.1| 400|Homo sapiens DNA polymerase-transact... 30 5.3
AK075141-1|BAC11430.1| 400|Homo sapiens protein ( Homo sapiens ... 30 5.3
AK074985-1|BAC11334.1| 400|Homo sapiens protein ( Homo sapiens ... 30 5.3
AC013722-2|AAY15089.1| 163|Homo sapiens unknown protein. 30 5.3
AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain... 27 8.4
AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain... 27 8.4
AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain... 27 8.4
AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain... 27 8.4
AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain... 27 8.4
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 35.5 bits (78), Expect = 0.14
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +1
Query: 259 SLPSMTSCAPKQPRLSKMRPVEFAPTLRL*STGLALWCRAPSPYHHSTPSTHIHTANRSR 438
S PS TS + APT R S AP+ S P+T ++A +
Sbjct: 1093 STPSTTSAPTTSTTSAPTTSTTSAPTHRTTSGPTTSTTLAPTTSTTSAPTTSTNSAPTTS 1152
Query: 439 TVSAMTLTLLSF-WCPYAASRIASTIFPSITSQPRSSLDAATSRACTTP 582
T+SA T + +S +S +ST TS+ ++ + TS + TTP
Sbjct: 1153 TISASTTSTISAPTTSTISSPTSSTTSTPQTSKTSAATSSTTSGSGTTP 1201
Score = 34.3 bits (75), Expect = 0.33
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 328 APTLRL*STGLALWCRAPSPYHHSTPSTHIHTANRSRTVSAMTLTLLSFWCPYAASRIAS 507
APT S AP+ STP T I +A S T SA T + +S + I S
Sbjct: 353 APTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTSSTIS----ARTTSIIS 408
Query: 508 TIFPSITSQPRSSLDAATSRACTT 579
S TS P +S +AT+ + T+
Sbjct: 409 APTTSTTSSPTTSTTSATTTSTTS 432
Score = 33.1 bits (72), Expect = 0.76
Identities = 30/107 (28%), Positives = 47/107 (43%)
Frame = +1
Query: 259 SLPSMTSCAPKQPRLSKMRPVEFAPTLRL*STGLALWCRAPSPYHHSTPSTHIHTANRSR 438
S+PS TS + APT ST AP+ S P+T +A +
Sbjct: 660 SIPSTTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTTTSSAPTSSTTSAPTTSTISAPTTS 719
Query: 439 TVSAMTLTLLSFWCPYAASRIASTIFPSITSQPRSSLDAATSRACTT 579
T+SA T + S P A++ A T S +S P ++ +A + + T+
Sbjct: 720 TISAPTTSTTS--APTASTTSAPT---STSSAPTTNTTSAPTTSTTS 761
>Z34277-1|CAA84031.1| 477|Homo sapiens mucin protein.
Length = 477
Score = 33.1 bits (72), Expect = 0.76
Identities = 28/84 (33%), Positives = 38/84 (45%)
Frame = +1
Query: 328 APTLRL*STGLALWCRAPSPYHHSTPSTHIHTANRSRTVSAMTLTLLSFWCPYAASRIAS 507
APT S AP+ STP T I +A S T SA T + +S + I S
Sbjct: 177 APTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTSSTIS----ARTTSIIS 232
Query: 508 TIFPSITSQPRSSLDAATSRACTT 579
S TS P +S +AT+ + T+
Sbjct: 233 APTTSTTSFPTTSTTSATTTSTTS 256
Score = 30.3 bits (65), Expect = 5.3
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 4/133 (3%)
Frame = +1
Query: 193 SAHPWSSVSWTESLTDAAQHWPSLPSMTSCAPKQPRLSKMRPVEFAPTLRL*STGLALWC 372
S W T +T + P S TS + APT ST
Sbjct: 149 STSSWQKSRTTTLVTTSTTSTPQT-STTSAPTTSTTSAPTTSTTSAPTTSTTSTPQTSIS 207
Query: 373 RAPSPYHHSTPSTHIHTANRSRTVSAMTLTLLSF--WCPYAASRIASTIFP--SITSQPR 540
AP+ S P++ +A + +SA T + SF +A+ ++T P S TS P+
Sbjct: 208 SAPTSSTTSAPTSSTISARTTSIISAPTTSTTSFPTTSTTSATTTSTTSAPTSSTTSTPQ 267
Query: 541 SSLDAATSRACTT 579
+S +A + + T+
Sbjct: 268 TSKTSAATSSTTS 280
>AK127398-1|BAC86959.1| 719|Homo sapiens protein ( Homo sapiens
cDNA FLJ45489 fis, clone BRTHA2005448, highly similar
to Mus musculus calpain 12 (Capn12). ).
Length = 719
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 199 HPWSSVSWTESLTDAAQHWPSLPSMTSCAPKQPRLSKMRPVEFAPTLR 342
+PW V WT + +D+ W +LP T C + L K EF LR
Sbjct: 283 NPWGCVEWTGAWSDSCPRWDTLP--TEC--RDALLVKKEDGEFWMELR 326
>BC045743-1|AAH45743.1| 400|Homo sapiens ring finger protein 149
protein.
Length = 400
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 369 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 250
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>BC032328-1|AAH32328.2| 400|Homo sapiens ring finger protein 149
protein.
Length = 400
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 369 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 250
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>BC019355-1|AAH19355.2| 400|Homo sapiens ring finger protein 149
protein.
Length = 400
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 369 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 250
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>AY450390-1|AAR21083.1| 400|Homo sapiens DNA
polymerase-transactivated protein 2 protein.
Length = 400
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 369 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 250
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>AK075141-1|BAC11430.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ90660 fis, clone PLACE1004887, weakly similar to
GOLIATH PROTEIN. ).
Length = 400
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 369 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 250
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>AK074985-1|BAC11334.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ90504 fis, clone NT2RP3004090, weakly similar to
GOLIATH PROTEIN. ).
Length = 400
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 369 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 250
P + P S+PQC F G + LL + RS R P+
Sbjct: 360 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 399
>AC013722-2|AAY15089.1| 163|Homo sapiens unknown protein.
Length = 163
Score = 30.3 bits (65), Expect = 5.3
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 369 PQSEPGGSKPQCRREFDGSHLRKSWLLRSARSHRRQRWPV 250
P + P S+PQC F G + LL + RS R P+
Sbjct: 123 PSASPAESEPQCDPSFKGDAGENTALLEAGRSDSRHGGPI 162
>AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1097
Score = 26.6 bits (56), Expect(2) = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 289 KQPRLSKMRP--VEFAPTLRL*STGLALWC-RAPSPYHHSTPSTHIHTANRSRTVSAMTL 459
+Q + S + P EF PT L S + +P P HSTPS + TA +S S +
Sbjct: 652 EQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRSHSTPSIPVLTAGQSGLYSPQYI 711
Query: 460 TLL 468
+ +
Sbjct: 712 SYI 714
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 217 SWTESLTDAAQHWPSLPSMTSCAPKQP 297
S TES++D P PS + P+QP
Sbjct: 598 SKTESVSDKEDKPPLAPSGGTEGPEQP 624
>AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1075
Score = 26.6 bits (56), Expect(2) = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 289 KQPRLSKMRP--VEFAPTLRL*STGLALWC-RAPSPYHHSTPSTHIHTANRSRTVSAMTL 459
+Q + S + P EF PT L S + +P P HSTPS + TA +S S +
Sbjct: 652 EQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRSHSTPSIPVLTAGQSGLYSPQYI 711
Query: 460 TLL 468
+ +
Sbjct: 712 SYI 714
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 217 SWTESLTDAAQHWPSLPSMTSCAPKQP 297
S TES++D P PS + P+QP
Sbjct: 598 SKTESVSDKEDKPPLAPSGGTEGPEQP 624
>AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1062
Score = 26.6 bits (56), Expect(2) = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 289 KQPRLSKMRP--VEFAPTLRL*STGLALWC-RAPSPYHHSTPSTHIHTANRSRTVSAMTL 459
+Q + S + P EF PT L S + +P P HSTPS + TA +S S +
Sbjct: 652 EQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRSHSTPSIPVLTAGQSGLYSPQYI 711
Query: 460 TLL 468
+ +
Sbjct: 712 SYI 714
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 217 SWTESLTDAAQHWPSLPSMTSCAPKQP 297
S TES++D P PS + P+QP
Sbjct: 598 SKTESVSDKEDKPPLAPSGGTEGPEQP 624
>AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 26.6 bits (56), Expect(2) = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 289 KQPRLSKMRP--VEFAPTLRL*STGLALWC-RAPSPYHHSTPSTHIHTANRSRTVSAMTL 459
+Q + S + P EF PT L S + +P P HSTPS + TA +S S +
Sbjct: 652 EQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRSHSTPSIPVLTAGQSGLYSPQYI 711
Query: 460 TLL 468
+ +
Sbjct: 712 SYI 714
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 217 SWTESLTDAAQHWPSLPSMTSCAPKQP 297
S TES++D P PS + P+QP
Sbjct: 598 SKTESVSDKEDKPPLAPSGGTEGPEQP 624
>AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 26.6 bits (56), Expect(2) = 8.4
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +1
Query: 289 KQPRLSKMRP--VEFAPTLRL*STGLALWC-RAPSPYHHSTPSTHIHTANRSRTVSAMTL 459
+Q + S + P EF PT L S + +P P HSTPS + TA +S S +
Sbjct: 652 EQVKKSTLNPNAKEFNPTKPLLSVNKSTSTPTSPGPRSHSTPSIPVLTAGQSGLYSPQYI 711
Query: 460 TLL 468
+ +
Sbjct: 712 SYI 714
Score = 21.4 bits (43), Expect(2) = 8.4
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 217 SWTESLTDAAQHWPSLPSMTSCAPKQP 297
S TES++D P PS + P+QP
Sbjct: 598 SKTESVSDKEDKPPLAPSGGTEGPEQP 624
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,886,093
Number of Sequences: 237096
Number of extensions: 2040356
Number of successful extensions: 6010
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5997
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -