Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31245
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical ... 33 0.15
AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical ... 33 0.15
AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid deplet... 33 0.15
Z81528-1|CAB04282.1| 345|Caenorhabditis elegans Hypothetical pr... 31 0.81
Z78062-4|CAB01498.2| 341|Caenorhabditis elegans Hypothetical pr... 29 1.9
U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical pr... 29 1.9
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 29 3.3
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 29 3.3
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 29 3.3
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical ... 29 3.3
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 28 5.7
U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1 prepropro... 27 10.0
AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical... 27 10.0
AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in ... 27 10.0
>AF039038-8|AAM81097.1| 874|Caenorhabditis elegans Hypothetical
protein K06A5.8a protein.
Length = 874
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 236 PTPPSTGHLCRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 370
PTP HLC L L ++DF+ +PS++R C F+ LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187
>AF039038-7|AAM81098.1| 942|Caenorhabditis elegans Hypothetical
protein K06A5.8b protein.
Length = 942
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 236 PTPPSTGHLCRR*LLA-LRSNQDFRR*DPSNSRRHCGFDPPGSLCG 370
PTP HLC L L ++DF+ +PS++R C F+ LCG
Sbjct: 143 PTPEDYRHLCALLTLPKLSDHEDFKNWNPSSARVEC-FNKVNQLCG 187
>AC024791-29|AAL32249.2| 1599|Caenorhabditis elegans Lipid depleted
protein 3 protein.
Length = 1599
Score = 33.1 bits (72), Expect = 0.15
Identities = 19/46 (41%), Positives = 22/46 (47%)
Frame = -1
Query: 159 GTSRVELPTEMSDGKSVQPSRCRWTCRADASCRSHSRIPWLMLVLS 22
GT+R LPT D KS+QP S H R PW LVL+
Sbjct: 922 GTTRSRLPT---DPKSLQPPAASTASTGSGSFVPHQRKPWTALVLA 964
>Z81528-1|CAB04282.1| 345|Caenorhabditis elegans Hypothetical
protein F35E2.1 protein.
Length = 345
Score = 30.7 bits (66), Expect = 0.81
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 273 DFLRSEATKTFEDETRRIRADTAALIHRA--RSVVPRAKSLSPLDTIYSYSYGEPIPYRF 446
+F+ K FE+E + I++ L +SV+P SL L + + +G P+P F
Sbjct: 215 NFVILRFVKHFENENKNIQSKIIQLTQSLLIQSVIPVIVSLPLLLLSFEFYFGIPMPSSF 274
Query: 447 SNDAYIAKLLVPLRSVADSI 506
+ Y L P SI
Sbjct: 275 GSTWYALTFLGPFLMPLSSI 294
>Z78062-4|CAB01498.2| 341|Caenorhabditis elegans Hypothetical
protein F16D3.6 protein.
Length = 341
Score = 29.5 bits (63), Expect = 1.9
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 273 DFLRSEATKTFED-ETRRIRADTAALIHRARSVVPRAKSLSPLDTIYSYSYGEPIPYRFS 449
+F+ K FE+ +++RI+ + LI +SV+P SL L + + +G P+P F
Sbjct: 215 NFVILRFVKHFENIQSKRIQLTQSLLI---QSVIPVIVSLPLLLLSFEFYFGIPMPSSFG 271
Query: 450 NDAYIAKLLVPLRSVADSI 506
+ Y L P SI
Sbjct: 272 STWYALTFLGPFLMPLSSI 290
>U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical
protein K02E10.4b protein.
Length = 487
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 382 SPYHHSTPSTHIHTANRSRTVSAMTLTLLSFWCPYAASRIASTIFPSITS--QPRSSLDA 555
+PY+HS PST + VS L LL ++ A + P + S +P L
Sbjct: 56 TPYYHSNPSTTFFMIPTTTFVSCYFLILLVYFASAQAPTCPNGQLPKLDSSLRPLQCLPG 115
Query: 556 ATSR 567
+TS+
Sbjct: 116 STSQ 119
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 28.7 bits (61), Expect = 3.3
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 210 LRELDRIAYRRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIH--RARSVVPRAK 383
L+ L ++ + RRP +DD+ + F+D+ + A +H R +V +
Sbjct: 363 LKWLPKLLFMRRP------IDDY-----EEKFDDKKKPKDGKIALSVHAHRVSNVGNNIR 411
Query: 384 SLSPLDTIYSYSYGEPIPYRFSNDAYIAKLL 476
+ + DTI Y P+ F N +IA+LL
Sbjct: 412 NATIDDTIQKMYYSPPVVKAFENICFIAELL 442
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 28.7 bits (61), Expect = 3.3
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 210 LRELDRIAYRRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIH--RARSVVPRAK 383
L+ L ++ + RRP +DD+ + F+D+ + A +H R +V +
Sbjct: 363 LKWLPKLLFMRRP------IDDY-----EEKFDDKKKPKDGKIALSVHAHRVSNVGNNIR 411
Query: 384 SLSPLDTIYSYSYGEPIPYRFSNDAYIAKLL 476
+ + DTI Y P+ F N +IA+LL
Sbjct: 412 NATIDDTIQKMYYSPPVVKAFENICFIAELL 442
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 28.7 bits (61), Expect = 3.3
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +3
Query: 210 LRELDRIAYRRRPALAISAVDDFLRSEATKTFEDETRRIRADTAALIH--RARSVVPRAK 383
L+ L ++ + RRP +DD+ + F+D+ + A +H R +V +
Sbjct: 363 LKWLPKLLFMRRP------IDDY-----EEKFDDKKKPKDGKIALSVHAHRVSNVGNNIR 411
Query: 384 SLSPLDTIYSYSYGEPIPYRFSNDAYIAKLL 476
+ + DTI Y P+ F N +IA+LL
Sbjct: 412 NATIDDTIQKMYYSPPVVKAFENICFIAELL 442
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/71 (26%), Positives = 31/71 (43%)
Frame = +1
Query: 259 SLPSMTSCAPKQPRLSKMRPVEFAPTLRL*STGLALWCRAPSPYHHSTPSTHIHTANRSR 438
++ S + P PR + +P+ ST +L +PSP HS S+ T +
Sbjct: 1957 TIGSTSGTNPSSPRSLSQITITPSPSQSTESTQTSLPSSSPSPSTHSVSSSEGTTMSSGA 2016
Query: 439 TVSAMTLTLLS 471
T S ++ LS
Sbjct: 2017 TTSGDKMSFLS 2027
>AF098993-5|AAC67468.1| 325|Caenorhabditis elegans Hypothetical
protein T10B11.6 protein.
Length = 325
Score = 28.7 bits (61), Expect = 3.3
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -2
Query: 203 GWADPDPHHVMRHIRVRHESSYR 135
GWA +P H+ ++I+V ++ YR
Sbjct: 75 GWAGANPKHIDKYIKVYNDEGYR 97
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 27.9 bits (59), Expect = 5.7
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = +1
Query: 382 SPYHHSTPSTHIHTANRSRTVSAMTLTLLSFWCPYAASRIASTIFPSITSQPR 540
+PY+HS PST + VS L LL ++ A + P + S R
Sbjct: 56 TPYYHSNPSTTFFMIPTTTFVSCYFLILLVYFASAQAPTCPNGQLPKLDSSLR 108
>U68185-1|AAC47444.1| 1042|Caenorhabditis elegans ADM-1
preproprotein protein.
Length = 1042
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 266 GRDGQCWAASVSDSVQ 219
G DGQCW + SDS Q
Sbjct: 529 GTDGQCWRGNCSDSHQ 544
>AL032626-12|CAA21545.1| 1042|Caenorhabditis elegans Hypothetical
protein Y37D8A.13 protein.
Length = 1042
Score = 27.1 bits (57), Expect = 10.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 266 GRDGQCWAASVSDSVQ 219
G DGQCW + SDS Q
Sbjct: 529 GTDGQCWRGNCSDSHQ 544
>AC006809-4|AAO25980.1| 339|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 4 protein.
Length = 339
Score = 27.1 bits (57), Expect = 10.0
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 552 VQ*TSWLTRDRRKDCGCYPR 493
++ T+ TR++R+ CGC PR
Sbjct: 17 IEATATSTREKRQSCGCAPR 36
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,383,987
Number of Sequences: 27780
Number of extensions: 287714
Number of successful extensions: 848
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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