Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31244
(355 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1159 - 24427896-24428288 29 0.79
02_05_0157 - 26353971-26354336,26354645-26354726,26354838-263549... 29 0.79
01_06_0191 - 27334412-27335155 29 0.79
05_03_0617 - 16257281-16257943 29 1.4
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 1.8
01_06_0400 + 29033256-29034027,29034153-29034202,29034286-29034621 28 2.4
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905... 27 3.2
03_01_0615 + 4523202-4524518 27 3.2
02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184 27 3.2
09_02_0112 - 4396756-4397406,4397514-4397717 27 4.2
02_02_0479 - 10775382-10775656,10776513-10777535,10777725-107784... 23 4.7
09_03_0096 + 12328116-12329561,12329810-12329852,12332119-123322... 27 5.6
04_04_1108 + 30961600-30962013,30963131-30964465 27 5.6
05_01_0380 + 2978256-2979284 26 7.4
02_04_0448 - 23001579-23001683,23001783-23002382,23002479-230026... 26 7.4
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 26 9.8
10_05_0086 + 9025410-9025730,9025974-9026008,9026194-9026279,902... 26 9.8
07_01_0633 - 4735298-4735485,4736083-4736114,4736203-4736297,473... 26 9.8
04_04_0951 + 29614196-29615275 26 9.8
03_05_0571 - 25713519-25714064,25714673-25714804 26 9.8
03_02_0849 - 11768191-11771412 26 9.8
>07_03_1159 - 24427896-24428288
Length = 130
Score = 29.5 bits (63), Expect = 0.79
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 136 PALSLPKLSSAESPKLPNPESWCPNPES 53
P LP L E P LP PE P PE+
Sbjct: 101 PKPELPSLPKVELPPLPKPEFHFPEPEA 128
>02_05_0157 -
26353971-26354336,26354645-26354726,26354838-26354933,
26355365-26356068
Length = 415
Score = 29.5 bits (63), Expect = 0.79
Identities = 11/21 (52%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = -1
Query: 85 NPESW--CPNPESWCPNPGIM 29
NP+SW C + E WC N GI+
Sbjct: 253 NPQSWGNCVSVEEWCKNKGII 273
>01_06_0191 - 27334412-27335155
Length = 247
Score = 29.5 bits (63), Expect = 0.79
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -3
Query: 347 VYTTREL*AVKQIVLTCXDQCLRPFAIFEVRAPPMAVPIPPNEVAMPSR 201
V T L AVK + + D+ L PF +F V+AP A P A P +
Sbjct: 160 VTVTNALSAVKPLAVYSVDKVLLPFELFGVKAPAAA---PTASTAKPKK 205
>05_03_0617 - 16257281-16257943
Length = 220
Score = 28.7 bits (61), Expect = 1.4
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = -1
Query: 145 FTCPALSLPKLSSAESPKLP--NPES----WCPNPESWC 47
F P L+ P+ S+A SP P +P W P P WC
Sbjct: 19 FLSPPLAAPRCSTALSPSSPPFHPTRLRIRWAPPPVGWC 57
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -1
Query: 127 SLPKLSSAESPKLPNPESWCPNPESWCPNPGIMVSKPGVH 8
S P+ S +P+P + P P S+ P+P +P V+
Sbjct: 681 SPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVY 720
Score = 27.5 bits (58), Expect = 3.2
Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -1
Query: 127 SLPKLSSAESPK--LPNPESWCPNPESWCPNPGIMVSKPGVH 8
S P+++ SP +P+P S+ P+P S+ P+P +P V+
Sbjct: 630 SPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVY 671
>01_06_0400 + 29033256-29034027,29034153-29034202,29034286-29034621
Length = 385
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 208 LQGPFRFYLRTIPWSAKLEISFTCPAL 128
LQ PFR L+ IPW+A EI AL
Sbjct: 102 LQEPFRQVLKRIPWTADHEIDHVNLAL 128
>04_04_0293 -
24189344-24189350,24189804-24190026,24190411-24190529,
24191331-24191578
Length = 198
Score = 27.5 bits (58), Expect = 3.2
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -1
Query: 181 RTIPWSAKLEISFTCPALSLPKLSSAESPKLPNPESWCPNPESWCPNPGIMVSKPGVHGV 2
R P +A T PA PK ++ +P P P+PE+ P+P ++P V
Sbjct: 30 RKAPAAAGPAPKATAPAGPAPKATATAAPSSKAPSPAAPSPEA--PSPVAPAARPSYSSV 87
>03_01_0615 + 4523202-4524518
Length = 438
Score = 27.5 bits (58), Expect = 3.2
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = -1
Query: 142 TCPALSL-PKLSSAESPKLPNPESWCPNPESW-CPNP 38
TCP+ SL +S+ LP SWCP + CP P
Sbjct: 112 TCPSSSLFAPANSSSYASLPCSSSWCPLFQGQACPAP 148
>02_05_0112 - 25931775-25932078,25932554-25932732,25934033-25935184
Length = 544
Score = 27.5 bits (58), Expect = 3.2
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = -1
Query: 136 PALSLPKLSSAESPKLPNPESWCPNPESWCPNPG 35
PA SSA + P SW P+P W PG
Sbjct: 249 PASLTEAASSAPAFPPRRPNSWAPSPAPWPYTPG 282
>09_02_0112 - 4396756-4397406,4397514-4397717
Length = 284
Score = 27.1 bits (57), Expect = 4.2
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = +2
Query: 140 RKGYFQFSRPWYSTKIKSKRALKALPLHWAVSALPLVVPS-PQISQM 277
R F SR WY + K A+ LPL PL P+ P++ +
Sbjct: 44 RHSSFPVSR-WYEKRPNPKEAMNTLPLQHPPVVAPLAAPTRPELKPL 89
>02_02_0479 -
10775382-10775656,10776513-10777535,10777725-10778461,
10779008-10779155,10779331-10779856
Length = 902
Score = 23.4 bits (48), Expect(2) = 4.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 61 PESWCPNPGIMVSKPGVHG 5
P++WCP P +MV P G
Sbjct: 860 PKAWCPKP-LMVVAPANAG 877
Score = 21.8 bits (44), Expect(2) = 4.7
Identities = 7/12 (58%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
Frame = -1
Query: 91 LPN-PESWCPNP 59
LP+ P++WCP P
Sbjct: 856 LPSVPKAWCPKP 867
>09_03_0096 +
12328116-12329561,12329810-12329852,12332119-12332237,
12333326-12333853
Length = 711
Score = 26.6 bits (56), Expect = 5.6
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -1
Query: 121 PKLSSAESPKLPNPESWCPNPESWC 47
P ++SAES +LP P + P +C
Sbjct: 190 PAIASAESDELPPPAAAAPGQRGYC 214
>04_04_1108 + 30961600-30962013,30963131-30964465
Length = 582
Score = 26.6 bits (56), Expect = 5.6
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3
Query: 272 AIFEVRAPPMAVPIPPNEVAMPS 204
A+ V APP A+PI N AM S
Sbjct: 115 AVVSVVAPPAAIPITSNRPAMTS 137
>05_01_0380 + 2978256-2979284
Length = 342
Score = 26.2 bits (55), Expect = 7.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 260 VRAPPMAVPIPPNEVAMPSRPFS 192
VR PP P PP P RPFS
Sbjct: 23 VRMPPPPPPPPPPPPPPPPRPFS 45
>02_04_0448 -
23001579-23001683,23001783-23002382,23002479-23002628,
23002788-23003015,23003188-23003302,23003392-23004659,
23006621-23006692
Length = 845
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 109 SAESPKLPNPESWCPNPESWCPNPGIMVSKPGVHG 5
S P +P P S+ P+P P PG ++S +HG
Sbjct: 378 SRPPPPMPAPMSYGPSPHF--PYPGRLLSSGHLHG 410
>11_06_0557 -
24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 25.8 bits (54), Expect = 9.8
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 154 EISFTCPALSLPKLSSAESPKLPNPESWCPNPESWCPNPGIMVSKPG 14
+I TC AL+ LSS E P+L E W + + I++S PG
Sbjct: 649 QIRRTCLALTETVLSSIELPQL---EGWSDLEDFCIRHSHIIISTPG 692
>10_05_0086 +
9025410-9025730,9025974-9026008,9026194-9026279,
9026602-9026740,9028504-9028663
Length = 246
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 100 SPKLPNPESWCPNPESWCPNPGIMVSK 20
SP LP P S C P SW + ++ +
Sbjct: 56 SPPLPPPASSCALPSSWLSSTSSLLGR 82
>07_01_0633 -
4735298-4735485,4736083-4736114,4736203-4736297,
4736414-4736487,4736682-4736817,4736902-4736965,
4737101-4737166,4737265-4737446,4737824-4737948,
4738031-4738169,4738250-4738369,4738675-4738746,
4738900-4738935,4739633-4739749,4739821-4739953,
4740053-4740156,4740243-4740370,4740880-4741010,
4741561-4741757,4743906-4744583
Length = 938
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 254 APPMAVPIPPNEVAMPSRP 198
APP +P+ VA PSRP
Sbjct: 178 APPAPIPVSSKGVAPPSRP 196
>04_04_0951 + 29614196-29615275
Length = 359
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 187 YLRTIPWSAKLEISFTCPALSLPKLSSAESPKLPNPES 74
+LRT P + T P S+ + +AE P P P S
Sbjct: 159 WLRTTPSCPLCRATVTLPHPSISAILAAEQPPPPEPRS 196
>03_05_0571 - 25713519-25714064,25714673-25714804
Length = 225
Score = 25.8 bits (54), Expect = 9.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1
Query: 151 ISFTCPALSLPKLSSAESPKLPNPESWCPNPESWCP 44
++ CP L L S P+ P ES P P S P
Sbjct: 175 VAAACPRCFLYVLISRSDPRCPRCESHVPPPPSPAP 210
>03_02_0849 - 11768191-11771412
Length = 1073
Score = 25.8 bits (54), Expect = 9.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 76 SWCPNPESWCPNPG 35
S CP+ ESWC N G
Sbjct: 1046 SGCPDLESWCRNTG 1059
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,819,978
Number of Sequences: 37544
Number of extensions: 203083
Number of successful extensions: 832
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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