Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31243
         (320 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       25   0.26 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   0.79 
AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase l...    21   2.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   4.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   4.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   5.5  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    20   5.5  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    20   5.5  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.6 bits (51), Expect = 0.26
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 230 IDLANTKSGPNIHTRPDLXSAPP 298
           ID+  T+ GP I T+P    A P
Sbjct: 329 IDVHGTRRGPKIKTQPKAEEAKP 351


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 0.79
 Identities = 9/29 (31%), Positives = 12/29 (41%)
 Frame = +3

Query: 108 CAPHWARNPTMEYCSCTRTISRPRSRAME 194
           C      N   EYC CT  ++ P    +E
Sbjct: 490 CNESSVSNCENEYCECTHVVNIPLGTVVE 518


>AF260820-1|AAG02018.1|  139|Tribolium castaneum alpha-esterase like
           protein E1 protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 2.4
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +1

Query: 88  YTHPPWGVLHIGLGTRPWNIVPVQEQYPGRDPVQWR 195
           Y  PP+GVL       P N   V +     DP   R
Sbjct: 6   YAQPPFGVLRFKAPQPPENWTGVLDATKEGDPCYGR 41


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 88  YTHPPWGVLHI 120
           Y H PW  LH+
Sbjct: 532 YNHRPWQQLHL 542


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 4.2
 Identities = 9/29 (31%), Positives = 10/29 (34%)
 Frame = +1

Query: 97  PPWGVLHIGLGTRPWNIVPVQEQYPGRDP 183
           PP     +G G  PW   P     P   P
Sbjct: 53  PPLADAAVGKGFHPWKKSPQGAPSPSSTP 81


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/25 (32%), Positives = 10/25 (40%)
 Frame = -3

Query: 258 GPDFVLAKSIWVVQRMRRGSYPPLH 184
           GP  V   + W   R   G + P H
Sbjct: 636 GPKVVCYMTNWAFYRKAEGKFVPEH 660


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 114 PHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPP 227
           P+ A  PT    S  +T +   S  +   SL +S  PP
Sbjct: 296 PYSAPGPTYSTWSTVQTPTTVMSPTINCWSLTSSPPPP 333


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -2

Query: 199 LPSIARDLGLDIV 161
           +P IAR LG DIV
Sbjct: 61  VPFIARSLGEDIV 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,801
Number of Sequences: 336
Number of extensions: 2543
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)