Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31243
(320 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 29 0.043
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 27 0.23
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 1.2
CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase ... 24 1.6
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 24 1.6
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 24 1.6
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 24 1.6
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 24 1.6
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 24 1.6
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 24 1.6
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 24 1.6
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 24 1.6
AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismuta... 23 2.8
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 2.8
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 22 4.9
AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein p... 22 4.9
Y17705-1|CAA76825.1| 124|Anopheles gambiae opsin protein. 22 6.5
EF519501-1|ABP68550.1| 178|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519500-1|ABP68549.1| 177|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519499-1|ABP68548.1| 178|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519498-1|ABP68547.1| 178|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519497-1|ABP68546.1| 180|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519496-1|ABP68545.1| 233|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519495-1|ABP68544.1| 233|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519494-1|ABP68543.1| 160|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519493-1|ABP68542.1| 233|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519492-1|ABP68541.1| 180|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519491-1|ABP68540.1| 178|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519490-1|ABP68539.1| 176|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519489-1|ABP68538.1| 177|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519488-1|ABP68537.1| 178|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519487-1|ABP68536.1| 233|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519486-1|ABP68535.1| 178|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519485-1|ABP68534.1| 233|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519483-1|ABP68532.1| 233|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519482-1|ABP68531.1| 233|Anopheles gambiae ENSANGG00000019219... 22 6.5
EF519481-1|ABP68530.1| 233|Anopheles gambiae ENSANGG00000019219... 22 6.5
AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding pr... 22 6.5
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript... 22 6.5
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 21 8.6
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 21 8.6
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 21 8.6
AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subu... 21 8.6
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 21 8.6
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 29.1 bits (62), Expect = 0.043
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 256 PRLRIGQINLGGAEDATRELPSIARDLGLDIVLVQEQY 143
P+LR+ Q+NLG E A A++ +D++L+ E Y
Sbjct: 3 PQLRVMQVNLGRGERAQDIALQTAQEKRVDVLLLLELY 40
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 26.6 bits (56), Expect = 0.23
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -2
Query: 253 RLRIGQINLGGAEDATRELPSIARDLGLDIVLVQEQY 143
+L++ Q+NLGG A + AR + +D++++ Y
Sbjct: 60 QLKVLQVNLGGGRIAQDLVLQTARQMEVDVLVLSHTY 96
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 24.2 bits (50), Expect = 1.2
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 136 PWNIVPVQEQYPGRDP 183
PWN +PV+ P R+P
Sbjct: 735 PWNDLPVETSSPVREP 750
>CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase
protein.
Length = 562
Score = 23.8 bits (49), Expect = 1.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 279 SGRVWILGPDFVLAKSIWVV 220
SG WI GPD ++ + + VV
Sbjct: 129 SGNSWIYGPDNLMPEDVVVV 148
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 102 LGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRL 233
L CAP NP C +S ++ + A+ APP+L
Sbjct: 140 LNCAPGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKL 183
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 102 LGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRL 233
L CAP NP C +S ++ + A+ APP+L
Sbjct: 140 LNCAPGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKL 183
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 102 LGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRL 233
L CAP NP C +S ++ + A+ APP+L
Sbjct: 139 LNCAPGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKL 182
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 102 LGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRL 233
L CAP NP C +S ++ + A+ APP+L
Sbjct: 139 LNCAPGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKL 182
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 102 LGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRL 233
L CAP NP C +S ++ + A+ APP+L
Sbjct: 139 LNCAPGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKL 182
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 102 LGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRL 233
L CAP NP C +S ++ + A+ APP+L
Sbjct: 139 LNCAPGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKL 182
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 102 LGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRL 233
L CAP NP C +S ++ + A+ APP+L
Sbjct: 211 LNCAPGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKL 254
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 102 LGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRL 233
L CAP NP C +S ++ + A+ APP+L
Sbjct: 210 LNCAPGTLFNPNTRECDHPSKVSCLPVPSLNSVNEPANRAPPKL 253
>AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide
dismutase 2 protein.
Length = 211
Score = 23.0 bits (47), Expect = 2.8
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 25 TTVICVLLSGAEPRRGAPY 81
+TV+CV+L+ +PR+ Y
Sbjct: 8 STVLCVVLAKDQPRKAIVY 26
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -1
Query: 146 IFHGRVPSPMWSTPQGGCVY 87
I H V PM T GGC Y
Sbjct: 341 IIHSDVCGPMEETTLGGCRY 360
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 210 RRGSYPPLHGISAWILFL 157
RRG P+ G+ +W+ FL
Sbjct: 734 RRGWLIPMGGVPSWLPFL 751
>AB090820-1|BAC57915.1| 527|Anopheles gambiae gag-like protein
protein.
Length = 527
Score = 22.2 bits (45), Expect = 4.9
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 1 DKSHPPM-CTTVICVLLSGAEPRRGAPYCG 87
D++H CT + +L G R GA CG
Sbjct: 493 DQTHKASGCTNEVKCMLCGGAHRIGAAACG 522
>Y17705-1|CAA76825.1| 124|Anopheles gambiae opsin protein.
Length = 124
Score = 21.8 bits (44), Expect = 6.5
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -2
Query: 112 AHPKAGVYIRN-RVLPCAVLHHLAAHI 35
A P ++R+ RVL A HHL H+
Sbjct: 4 AEPLVHHHLRHLRVLAAAADHHLLVHL 30
>EF519501-1|ABP68550.1| 178|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 178
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519500-1|ABP68549.1| 177|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519499-1|ABP68548.1| 178|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 178
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519498-1|ABP68547.1| 178|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 178
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519497-1|ABP68546.1| 180|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 180
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519496-1|ABP68545.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519495-1|ABP68544.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519494-1|ABP68543.1| 160|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 160
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519493-1|ABP68542.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519492-1|ABP68541.1| 180|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 180
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519491-1|ABP68540.1| 178|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 178
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519490-1|ABP68539.1| 176|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 176
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519489-1|ABP68538.1| 177|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 177
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519488-1|ABP68537.1| 178|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 178
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519487-1|ABP68536.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519486-1|ABP68535.1| 178|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 178
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519485-1|ABP68534.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519483-1|ABP68532.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519482-1|ABP68531.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>EF519481-1|ABP68530.1| 233|Anopheles gambiae
ENSANGG00000019219-like protein.
Length = 233
Score = 21.8 bits (44), Expect = 6.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 128 EPDHGILFLYK 160
EP HG++FL+K
Sbjct: 21 EPVHGLVFLFK 31
>AY146756-1|AAO12071.1| 282|Anopheles gambiae odorant-binding
protein AgamOBP40 protein.
Length = 282
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +1
Query: 37 CVLLSGAEPRRGAPYCGYTHPP 102
C+L G P R Y + +PP
Sbjct: 45 CILFMGINPLRLDQYKKFVYPP 66
>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 21.8 bits (44), Expect = 6.5
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 238 QINLGGAEDATRELPSIARDLGLDIVLVQEQY 143
QIN+ + + A++ D++LV E Y
Sbjct: 6 QINISNCSTSQNLMLQAAKEQHADVILVSELY 37
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/22 (40%), Positives = 10/22 (45%)
Frame = +1
Query: 163 QYPGRDPVQWRVAPSSHPLHHP 228
Q+P VQ HP HHP
Sbjct: 124 QHPHLPHVQQHHPSVHHPAHHP 145
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 21.4 bits (43), Expect = 8.6
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 87 IYTPALGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASS 218
+Y PA P A+ PT+ S R G ++ASS
Sbjct: 448 VYYPARETLPRLAQPPTITRSSSMFPDWSARENGTNGGIMMASS 491
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 21.4 bits (43), Expect = 8.6
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +3
Query: 84 RIYTPALGCAPHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSA 221
R+Y P C P + R +M + + + S + SS V++SA
Sbjct: 1849 RLYQPVRLCGPCYQRISSMTVPATSSVSTTGGSSSTMVSSAVSNSA 1894
>AJ292755-1|CAC00630.1| 837|Anopheles gambiae integrin beta subunit
protein.
Length = 837
Score = 21.4 bits (43), Expect = 8.6
Identities = 8/19 (42%), Positives = 9/19 (47%)
Frame = -1
Query: 212 CDEGATLHCTGSRPGYCSC 156
CD L C+G G C C
Sbjct: 595 CDRPGGLLCSGPDHGRCVC 613
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 21.4 bits (43), Expect = 8.6
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1
Query: 7 SHPPMCTTVICVLLSGAEPRRGA 75
S+PP CT+ + SG R A
Sbjct: 21 SNPPTCTSAKMMASSGMSTRASA 43
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 450,852
Number of Sequences: 2352
Number of extensions: 10733
Number of successful extensions: 51
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 21613350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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