Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31243
(320 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 23 1.2
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 22 1.6
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 22 2.1
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 2.8
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 3.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 3.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.4
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.4
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.4
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 6.4
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 6.4
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 20 6.4
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 20 6.4
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 20 8.4
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 22.6 bits (46), Expect = 1.2
Identities = 11/25 (44%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = -1
Query: 203 GATLHCTGSRPGYCSC-TGTIFHGR 132
G L C SRPG C G I G+
Sbjct: 169 GRVLACISSRPGQCGREDGYILEGK 193
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.2 bits (45), Expect = 1.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 78 GCSPARFCTT*QHTYNGSAHWGVG 7
G A+ +TYN S +WG G
Sbjct: 247 GPEAAKMAKAFTYTYNYSMYWGQG 270
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.8 bits (44), Expect = 2.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 213 SSAPPRLIWPIRSRGLISILDLIXEALLR 299
S+ PP ++ R +S+ LI ALLR
Sbjct: 309 STNPPNILLYYRDSLALSVFALILTALLR 337
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 2.8
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 111 APHWARNPTMEYCSCTRTISRPRSRAMEGSSLVASSAPPRLIWPIRS 251
+P+ + +P E C+ T TI+ + +G A+S WP S
Sbjct: 740 SPNASPSPA-EQCASTTTITARSPQGSQGLLQCATSNYSTTRWPATS 785
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.0 bits (42), Expect = 3.7
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = +2
Query: 227 QIDLANTKSGPNIHTRPDLXSAPPHAGAPDS 319
+++ N S IH P +APP +S
Sbjct: 432 ELEAVNLGSACRIHGSPATTAAPPQLPTEES 462
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 3.7
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 207 VASSAPPRLIWP 242
VA PPR +WP
Sbjct: 571 VAEWEPPRALWP 582
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 93 TPALGCAPHWARNPTMEYCSCTRTISRP 176
TP P W + +++ C +SRP
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRP 312
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 93 TPALGCAPHWARNPTMEYCSCTRTISRP 176
TP P W + +++ C +SRP
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRP 312
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 93 TPALGCAPHWARNPTMEYCSCTRTISRP 176
TP P W + +++ C +SRP
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRP 312
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 93 TPALGCAPHWARNPTMEYCSCTRTISRP 176
TP P W + +++ C +SRP
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRP 312
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 93 TPALGCAPHWARNPTMEYCSCTRTISRP 176
TP P W + +++ C +SRP
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRP 312
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 93 TPALGCAPHWARNPTMEYCSCTRTISRP 176
TP P W + +++ C +SRP
Sbjct: 285 TPDRYVMPSWIKMLFLQWLPCLLRMSRP 312
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 93 TPALGCAPHWARNPTMEYCSCTRTISRP 176
TP P W + +++ C +SRP
Sbjct: 353 TPDRYVMPSWIKMLFLQWLPCLLRMSRP 380
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +3
Query: 93 TPALGCAPHWARNPTMEYCSCTRTISRP 176
TP P W + +++ C +SRP
Sbjct: 353 TPDRYVMPSWIKMLFLQWLPCLLRMSRP 380
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 20.2 bits (40), Expect = 6.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 218 CTTQIDLANTKSGPNIHTRPDLXS 289
C T++ + + G +H P+L S
Sbjct: 744 CITEVMMLGSIVGTPVHMAPELLS 767
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 20.2 bits (40), Expect = 6.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 218 CTTQIDLANTKSGPNIHTRPDLXS 289
C T++ + + G +H P+L S
Sbjct: 782 CITEVMMLGSIVGTPVHMAPELLS 805
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 19.8 bits (39), Expect = 8.4
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +3
Query: 240 PIRSRGLISILD 275
P RGL+SI+D
Sbjct: 114 PCEHRGLVSIID 125
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,767
Number of Sequences: 438
Number of extensions: 2728
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 6968808
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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