Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31241
         (543 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    25   0.57 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   0.75 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   0.75 
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   4.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   5.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   7.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.0  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +2

Query: 71  KMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQ 250
           KM   K +KD   D+ A+ + + +      EKA+ +   + K   TIEN L     S   
Sbjct: 70  KMVKQKHKKDIRADKKALQKLRRE-----VEKAKRDLSSVHKTTLTIENLLADYDFSETL 124

Query: 251 VNGKLEE 271
              K EE
Sbjct: 125 TRAKFEE 131


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 197  KIQTIENE-LDQTQESLMQVNGKLEEKEK 280
            K    ENE L + QESL  +N K+E  EK
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK 1121


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 0.75
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +2

Query: 197  KIQTIENE-LDQTQESLMQVNGKLEEKEK 280
            K    ENE L + QESL  +N K+E  EK
Sbjct: 1093 KADNKENEQLRKIQESLRDLNRKIESLEK 1121


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 145 VFGLLLTHGSAVERIV 98
           VFG LLT+ S+VE ++
Sbjct: 9   VFGALLTYVSSVEYLI 24


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 12/37 (32%), Positives = 16/37 (43%)
 Frame = -2

Query: 380 WRSRDAPRTSGGPPPAVGYVGSGQPLRTQRSAEPSPS 270
           W +   P T   P      + S  P   Q SA+P+PS
Sbjct: 307 WSTVQTPTTVMSPTINCWSLTSSPPPPYQISAQPTPS 343


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 325 YPTAGGGPPEVRGASRDRHRQAVRGQ 402
           YP  G    E+RG SR ++ + V  Q
Sbjct: 445 YPLIGAMREELRGISRGKNAKDVDWQ 470


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 322 TYPTAGGGPPEVRGASR 372
           T+P+ GGGP    G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 322 TYPTAGGGPPEVRGASR 372
           T+P+ GGGP    G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,456
Number of Sequences: 336
Number of extensions: 1785
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)