Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31239
         (510 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor...   191   7e-48
UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;...    33   3.8  
UniRef50_UPI00004D976B Cluster: UPI00004D976B related cluster; n...    32   6.6  
UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA...    32   8.7  
UniRef50_A5KCN3 Cluster: Putative uncharacterized protein; n=1; ...    32   8.7  

>UniRef50_Q08738 Cluster: Larval cuticle protein LCP-30 precursor;
           n=1; Bombyx mori|Rep: Larval cuticle protein LCP-30
           precursor - Bombyx mori (Silk moth)
          Length = 239

 Score =  191 bits (466), Expect = 7e-48
 Identities = 95/143 (66%), Positives = 95/143 (66%)
 Frame = +2

Query: 80  GKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYNXXXXXXXXX 259
           GKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYN         
Sbjct: 20  GKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAYNGDRGDRGAA 79

Query: 260 XXXXXXXXXXXXXXXXXXXXKEDLSKYLGDAYKGSSIXXXXXXXXXXXXXXXXXXXASKV 439
                               KEDLSKYLGDAYKGSSI                   ASKV
Sbjct: 80  GGFYTGSGTAGGPGGAYVGTKEDLSKYLGDAYKGSSIVPLPVVKPTIPVPVTPTYVASKV 139

Query: 440 VTPTYVASKVVPPSGAGYDYKYG 508
           VTPTYVASKVVPPSGAGYDYKYG
Sbjct: 140 VTPTYVASKVVPPSGAGYDYKYG 162



 Score = 44.8 bits (101), Expect = 0.001
 Identities = 22/25 (88%), Positives = 22/25 (88%)
 Frame = +1

Query: 22 MRVFLAICLSLTVALAAETGKVHSF 96
          MRVFLAICLSLTVALAAETGK   F
Sbjct: 1  MRVFLAICLSLTVALAAETGKYTPF 25


>UniRef50_A2FYW8 Cluster: Putative uncharacterized protein; n=14;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 645

 Score = 33.1 bits (72), Expect = 3.8
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 488 RRRWVGPPCWQRMWV*PPCWQRMWV*LAREW*ASRRAGEQCW 363
           +R  V   CWQR+ V   CWQR+ V +   W  +   GE CW
Sbjct: 70  QRAGVEDECWQRVGVEEECWQRV-VAVEESWQRAGVVGE-CW 109



 Score = 32.7 bits (71), Expect = 5.0
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
 Frame = -2

Query: 488 RRRWVGPPCWQRMWV*PPCWQRMWV*LAREW*ASRRAG--EQCW 363
           +R  V   CWQR+   P CWQR+ V + + W   +RAG  ++CW
Sbjct: 460 QRAGVVGECWQRVVAVPRCWQRV-VAVPKCW---QRAGAEDECW 499


>UniRef50_UPI00004D976B Cluster: UPI00004D976B related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00004D976B UniRef100 entry -
           Xenopus tropicalis
          Length = 205

 Score = 32.3 bits (70), Expect = 6.6
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 411 SHPHTLPARWSHPHTLPARWSH 476
           SHP+ LPA +SHP+ L A +SH
Sbjct: 88  SHPNPLPAPYSHPNPLLAPYSH 109



 Score = 32.3 bits (70), Expect = 6.6
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = +3

Query: 411 SHPHTLPARWSHPHTLPARWSH 476
           SHP+ L A +SHP+ LPA +SH
Sbjct: 128 SHPNPLLAPYSHPNPLPAPYSH 149


>UniRef50_UPI0000D56367 Cluster: PREDICTED: similar to CG30042-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG30042-PA - Tribolium castaneum
          Length = 275

 Score = 31.9 bits (69), Expect = 8.7
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 191 NSGRYIPDNSGAYN 232
           N GRY PDNSGAYN
Sbjct: 25  NDGRYYPDNSGAYN 38


>UniRef50_A5KCN3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 968

 Score = 31.9 bits (69), Expect = 8.7
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 65  WPPKLGKYTPFQYNRVYSTVSPFVYKPGRYVADPGRYDPS 184
           + P +    P  YN   +T+ P  Y P      PG Y+PS
Sbjct: 859 YSPSVATIQPGAYNPSVATIQPGAYSPSVATIQPGAYNPS 898


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,695,076
Number of Sequences: 1657284
Number of extensions: 7895158
Number of successful extensions: 25013
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24932
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30946432294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)