Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31238
(493 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog prote... 29 1.4
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 1.4
AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog (hedg... 29 1.4
Z82084-6|CAJ85781.1| 156|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 27 5.6
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 27 5.6
Z70271-7|CAJ80829.1| 559|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z70271-6|CAA94232.1| 562|Caenorhabditis elegans Hypothetical pr... 27 5.6
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 27 5.6
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 27 5.6
Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical p... 27 9.8
AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical... 27 9.8
AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical... 27 9.8
>AF139520-1|AAD33830.1| 176|Caenorhabditis elegans warthog protein
WRT-5 protein.
Length = 176
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 203 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 93
PS H+ +YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.5 bits (63), Expect = 1.4
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 1 QERTKTIKNEIDHRCSSRPCGYRHRCPPY-RGLP*DRSV*IRRQPRWSLQLQFRDFQRHR 177
Q K +KN++ +R SSR G H+ P + R LP D R+ R + Q +F+ + R
Sbjct: 2525 QLERKFLKNKVHNRRSSRAPGIHHQRPLHPRWLPTDHET-DRKDSRAASQFRFQHMRSKR 2583
>AF000298-2|AAC48258.1| 176|Caenorhabditis elegans Warthog
(hedgehog-like family)protein 5, isoform a protein.
Length = 176
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = -3
Query: 203 PSAHQFRYARCRWKSRNCSCKLHRGWRRIQTERS*GS 93
PS H+ +YA C ++ + +C + W T+ S GS
Sbjct: 48 PSCHEKKYAECPERATSTTCSTNSSWVGGVTQHSDGS 84
>Z82084-6|CAJ85781.1| 156|Caenorhabditis elegans Hypothetical
protein ZK1053.7 protein.
Length = 156
Score = 27.5 bits (58), Expect = 5.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 245 VRGSYSYTNTDGKPETITYF 304
++ +YSY N DG P + TY+
Sbjct: 112 IKDTYSYDNVDGTPISCTYY 131
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 279 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 392
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 279 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 392
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z70271-7|CAJ80829.1| 559|Caenorhabditis elegans Hypothetical
protein W08D2.3b protein.
Length = 559
Score = 27.5 bits (58), Expect = 5.6
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Frame = -1
Query: 478 SEHQIN-NE*QENVVDASPHNPVLRLHYLNLSREFRSLARGGGDLRNRFTLSMVSSLVSE 302
SEHQ + N + V+ PH P L YLN S + L+ ++ L +E
Sbjct: 180 SEHQEDCNSKRNPVLPTGPHIPSLEKFYLNPSLRQDYIFYATAILQIPL---LILCLKTE 236
Query: 301 VRNGFRFAVSVRVTV---ASTHSNNNVRLVVVVESLLQLTSFATHDAVGSLEIVVVSSIG 131
+ ++S+R T T++NNN +SL Q + V SL++V++ S+
Sbjct: 237 FNVSMKTSISIRRTEYDDIETNNNNNNHHHENCQSLTQQSD------VSSLKLVLLCSVV 290
Query: 130 AGV 122
A +
Sbjct: 291 ASI 293
>Z70271-6|CAA94232.1| 562|Caenorhabditis elegans Hypothetical
protein W08D2.3a protein.
Length = 562
Score = 27.5 bits (58), Expect = 5.6
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)
Frame = -1
Query: 478 SEHQIN-NE*QENVVDASPHNPVLRLHYLNLSREFRSLARGGGDLRNRFTLSMVSSLVSE 302
SEHQ + N + V+ PH P L YLN S + L+ ++ L +E
Sbjct: 183 SEHQEDCNSKRNPVLPTGPHIPSLEKFYLNPSLRQDYIFYATAILQIPL---LILCLKTE 239
Query: 301 VRNGFRFAVSVRVTV---ASTHSNNNVRLVVVVESLLQLTSFATHDAVGSLEIVVVSSIG 131
+ ++S+R T T++NNN +SL Q + V SL++V++ S+
Sbjct: 240 FNVSMKTSISIRRTEYDDIETNNNNNNHHHENCQSLTQQSD------VSSLKLVLLCSVV 293
Query: 130 AGV 122
A +
Sbjct: 294 ASI 296
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 279 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 392
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +3
Query: 279 ANLKPLRTSLTRLDTMLRVNLFLRSPPPRAKLLNSLDR 392
A L LRT L+ L ++LR +LFL + L N LDR
Sbjct: 611 AVLSTLRTQLSALSSLLRSSLFLGAVDLFDSLDNILDR 648
>Z66520-11|CAA91383.1| 269|Caenorhabditis elegans Hypothetical
protein F49E12.9a protein.
Length = 269
Score = 26.6 bits (56), Expect = 9.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 395 KSIQGI*KFSSWRRRPEE*IHPE 327
KSI+G + SW +P + IHPE
Sbjct: 242 KSIEGKRNYMSWSMKPIKQIHPE 264
>AC025726-36|AAL27268.1| 487|Caenorhabditis elegans Hypothetical
protein Y71G12B.1b protein.
Length = 487
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 152 NFETSNGIVRSETGELKEALDDDNKPHVIVAVRGS 256
NF + NG+ +G+ + D K +I AVRG+
Sbjct: 174 NFRSPNGVCWDPSGKYIATMSPDRKMDLIDAVRGA 208
>AC025726-35|AAL27267.1| 489|Caenorhabditis elegans Hypothetical
protein Y71G12B.1a protein.
Length = 489
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 152 NFETSNGIVRSETGELKEALDDDNKPHVIVAVRGS 256
NF + NG+ +G+ + D K +I AVRG+
Sbjct: 176 NFRSPNGVCWDPSGKYIATMSPDRKMDLIDAVRGA 210
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,830,218
Number of Sequences: 27780
Number of extensions: 207937
Number of successful extensions: 647
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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